Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03767 ATGGAGGATGGCCGTCAAAATGAAAATGACAGACATAAGATGGAATACTACAGAGGACCACATTCCATGTGGAATACTGGTTCCCAGCATCAAGTGAAGGAGCCAAATGCACTGGTTATGAATAAGAAGATTAGGTCCATTTTGGCTGAAAGGCAGGCTACTATTCTAGAGCTTGAACTGGAGGCTGCAATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAAGCCATTCGACAGAGGGATGAAGCACTTGTTCAAAGAGATAATGCTATTTTGGAACGGGATAATGCCCTTGCAGCCCTTCAGAGTCGGAACAGTTCTGTTACCTTCCCTTTTGGCAGTGGAATTCAATGTGGATCAAAACGAATTCATCATTCTTCAAACCATCTGTGTATCATGTCTGAAGCTGCGTACAAAACAAAGGATGCTTCCCCAATTACAGTTATACCTTCTGAAGTTGTCAAATCTCATCAAGCAAAGAGAACAAAGGAGAACAAGGTCATTGGTTCTAAGGCATCAAACCCACCCTACAAAGTAAAGAAAATGGGCGAGGATTTAAACAGGAAGGCTTCTTTTGAAGGTACAAAAATCCGATCTGAATGGCATAGGCAAGATGTTGGCCTGAATTTGGTTACATTTGATGAAACTACCATGCCAGTTCCAGTTTGCACATGTACTGGCATACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAGTCATCTTGTTGTACCACAACATTGTCTATGCATCCATTACCACAACTTCCAAACAAACGCCATGCTCGCATTGGAGGACGAAAGATGAGTGGAAGTGTTTTTACCAGACTTCTCAGCAGGTTGGTGTTAGAAGGCCATGATTTATCTATACCACTAGATCTTAAGGAGTATTGGGCCAGACATGGAACCAATCGCTACATCACCATCAAGTAG 939 0.4302 MEDGRQNENDRHKMEYYRGPHSMWNTGSQHQVKEPNALVMNKKIRSILAERQATILELELEAAISEKNEALAARDEAIRQRDEALVQRDNAILERDNALAALQSRNSSVTFPFGSGIQCGSKRIHHSSNHLCIMSEAAYKTKDASPITVIPSEVVKSHQAKRTKENKVIGSKASNPPYKVKKMGEDLNRKASFEGTKIRSEWHRQDVGLNLVTFDETTMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVLEGHDLSIPLDLKEYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03767 312 SMART GAGA_bind_2 1 312 IPR010409 -
Vian1g03767 312 Pfam GAGA binding protein-like family 13 312 IPR010409 -
Vian1g03767 312 MobiDBLite consensus disorder prediction 158 181 - -
Vian1g03767 312 Coils Coil 60 80 - -
Vian1g03767 312 PANTHER - 22 312 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03767 Vian-Chr1 60606593 60607626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03767 1 312 BBR or BPC Transcription factor family AT2G21240 59.554 1.09e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vian1g03767 GAGA_bind 1.6e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03767 - - gmx:100813103 550.821