Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03764 ATGGCTCCCTCAGACCAATCTCGCCACTCTCTTGTTCCTGGATTCTTATACTCATCAAAAATACAGTCCCATTTGAGTAATAACACCAATCATGGGTTGCCATTGCTACCATCATCATCCTCCATTGCATCGCATTCATCATCCTCATCGTTACCAGCGCAGGGTGGGGCCAAGTGTCCCGTGATCCTTTCACCAAAAGAGAAAATCCGCATGTTTTCTCCTGCCTACTATGCAGCATGCAGTGCCGGTGGGGTCTTCAGTTGTGGACTCACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATCACATCGGGATTTGGAGTGTTACTGAAGGAACAGGGTGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTGGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAATTCTTCAAGAAGTATTACTCAGACCTTGCAGGACCCGAGAATGCAGTGAAGTACAAAACGATCATATATCTAGCCGGTTCTGCTTCAGCTGAAGTTATTGCTGATATTGCCCTTTGCCCTATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTATCAGATGGGTTGCCCAAGTTTATCAAGGCCGACGGTGTTTCTGGGTTGTATAAAGGTATAGTTCCTCTTTGGGGGCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACCGTTGTGGAGATGATCTACAAAAACGTCATCCCAGTCCCGAAGGAGAAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATAGCAGGTGTGCTCTGTGCAGTTGTCTCACATCCTGCCGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTATTGGTGATGCTGTGAAGAAAATTGGGGTAGTAGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACCGGAGCACAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGACTGCCTACTACTGGAGGAAGTGCTCCTGCACCTGTTAAGTAG 1104 0.4665 MAPSDQSRHSLVPGFLYSSKIQSHLSNNTNHGLPLLPSSSSIASHSSSSSLPAQGGAKCPVILSPKEKIRMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTIIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKADGVSGLYKGIVPLWGRQIPYTMMKFASFETVVEMIYKNVIPVPKEKCSKNKQLGVSFAAGYIAGVLCAVVSHPADNLVSFLNNAKGATIGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPVK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03764 367 FunFam Phosphate carrier protein, mitochondrial 75 353 - -
Vian1g03764 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Vian1g03764 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Vian1g03764 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 54 363 IPR044677 GO:0005315|GO:1990547
Vian1g03764 367 Gene3D Mitochondrial carrier domain 76 353 IPR023395 -
Vian1g03764 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Vian1g03764 367 Pfam Mitochondrial carrier protein 177 260 IPR018108 -
Vian1g03764 367 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Vian1g03764 367 SUPERFAMILY Mitochondrial carrier 76 347 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03764 Vian-Chr1 60557411 60559696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03764 5 365 Chloroplast and Mitochondria Gene Families AT5G14040 73.315 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03764 K15102 - gmx:100800530 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03764 1 60557411 60559696 Vian1g03764 1 60557411 60559696 ECH