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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian1g03749
ATGGAAAGAGGCCACTTCCTTTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGCGTTTCCGTTTTATTTTTCTCGATCTAAGCAAGACGTGTCAGCTGTGGTATCAGCCCTTGTTCAAGTCATTGGTGGCAATCCACTGCCCGAAGATCCAACCACACTTTCTCACTCCACTGCTGTTCAGAATAATTCGAACGAACCATCACATCCACCACAACACCAAGATGCTCGCAAGGTGTTTGCTGAAATTCGTGACGTGTGATGTGGCTATGTGTGAAGGAAGCGCAAGAAAACAGTACAGAGGAGTGAGACAGCGACCATGGGGGAAGTGGGCCGCGGAGATTCGCGACCCGAAGAAAGCAGCCAGAGTTTGGCTGGGAACTTTTCCCACCGCGGAGGCTGCTGCACTTGCTTACGATGAAGCAGCTCTCAGATTCAAAGGAAGCAAAGCCAAGCTCAATTTTCCAGAAAAAGTTCATCTCTCAGGGGAATTAGGTTACCTCACAAATCGTCCACCATCGTTACAAGCCTCTTCAACTCCCTTCCAACTGCTTCCTCGTCACACTCCAACTGATAATGATGCCATTCTTTCTTCCTCTTCTTCGCCATCGTCTTCAACCTTTTCGATGAACTCCGCAGCTTCTTCTTCCGAACCTCCTACCAAACGGAAACCTGATTTCGATGCCAAACAAAAACTACATTAA
708
0.4718
MERGHFLWKKKKKKKKKKKKRFRFIFLDLSKTCQLWYQPLFKSLVAIHCPKIQPHFLTPLLFRIIRTNHHIHHNTKMLARCLLKFVTCDVAMCEGSARKQYRGVRQRPWGKWAAEIRDPKKAARVWLGTFPTAEAAALAYDEAALRFKGSKAKLNFPEKVHLSGELGYLTNRPPSLQASSTPFQLLPRHTPTDNDAILSSSSSPSSSTFSMNSAASSSEPPTKRKPDFDAKQKLH
235
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian1g03749
235
Gene3D
AP2/ERF domain
99
159
IPR036955
GO:0003700|GO:0006355
Vian1g03749
235
PANTHER
DNA-BINDING DOMAIN
21
214
IPR044808
GO:0003700|GO:0009873
Vian1g03749
235
CDD
AP2
99
158
IPR001471
GO:0003700|GO:0006355
Vian1g03749
235
SMART
rav1_2
100
163
IPR001471
GO:0003700|GO:0006355
Vian1g03749
235
SUPERFAMILY
DNA-binding domain
100
158
IPR016177
GO:0003677
Vian1g03749
235
MobiDBLite
consensus disorder prediction
173
235
-
-
Vian1g03749
235
PRINTS
Ethylene responsive element binding protein signature
123
139
IPR001471
GO:0003700|GO:0006355
Vian1g03749
235
PRINTS
Ethylene responsive element binding protein signature
101
112
IPR001471
GO:0003700|GO:0006355
Vian1g03749
235
Pfam
AP2 domain
100
149
IPR001471
GO:0003700|GO:0006355
Vian1g03749
235
ProSiteProfiles
AP2/ERF domain profile.
100
157
IPR001471
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian1g03749
Vian-Chr1
60361779
60365122
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian1g03749
98
182
AP2-EREBP Transcription Factor Family
AT5G61890
74.419
4.82e-39
134
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2/ERF-ERF
Vian1g03749
AP2
1.3e-14
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian1g03749
-
-
vun:114176190
319.316
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vian1g03749
1
60361779
60365122
Vian1g03749
1
60361779
60365122
ECH
Vian1g03749
1
60361779
60365122
Vian2g01576
2
32720344
32722905
ECH
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