Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03736 ATGTACATCACCTCCCCATCACCTCCATCGCTATTATTACTCACTGGCAAAACACCTGGCTCTTTAGGCCCTTTCATGACACTGGCTCATGACAAGGCCTCGCTTCGCAGCTGGTACCAACTGAAAGATGCAATTCTGGAAGGAGGTATTCCATTCAACAGGGCCCATGGCAAACACTTGTTTGAATACTCTGATATGAACCCAAGCTTCAATAATCTTTTTACTGCAACAATGACCAACTGTGCAACTATCATAATGAATAAGATTGTGGAATCCTACCATCGCGACCATGTCCACTTCGCCTTCCAGAAGGACCCAAGTTCCCAACCCGCTTTCCTCAACGAGCTTGCAACACCCATAATCGGACAAAGAGTCAGAGAAGAAGAGTTTGAGGTTGCTTCAGGAGTCCGTGTGGAGGACCTACTGCAACGGCAAAAAGTGTGGCTTTGCCACCAGAAGAGAATGTGGAGCGAAAGACTGGGAAATCCTGAAGGTCGTGGAGCCAATTTCAATGGGTGCAGGTGTTTTGCCAGTGAGTAA 540 0.4741 MYITSPSPPSLLLLTGKTPGSLGPFMTLAHDKASLRSWYQLKDAILEGGIPFNRAHGKHLFEYSDMNPSFNNLFTATMTNCATIIMNKIVESYHRDHVHFAFQKDPSSQPAFLNELATPIIGQRVREEEFEVASGVRVEDLLQRQKVWLCHQKRMWSERLGNPEGRGANFNGCRCFASE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03736 179 Gene3D Vaccinia Virus protein VP39 16 104 IPR029063 -
Vian1g03736 179 Pfam O-methyltransferase domain 38 94 IPR001077 GO:0008171
Vian1g03736 179 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 93 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03736 Vian-Chr1 60253864 60254591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03736 21 93 Monolignol Biosynthesis Gene Families AT5G54160 49.315 2.89e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03736 K13066 - var:108346646 169.859