Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03723 ATGGAGACAAAAGTGCTAAGGTTTATGTTACTTCTCTTCCTAGTCTTAGCAGATGATGTGACTGTGAAGAGAACAGAAGCTGAAATATGTTGGTCACCAAGCCGCTCTTTCAAGGGTTTATGCTTGAGCAGCGGCAAATGTGCAAGAGTGTGTCGAACCGAAGGTAACACTGGTGGCAAATGCAAAGGCTTCCTTCTCCGCTGTCACTGCAGCTCAACTTGTTGTTGTGGAAATTAA 237 0.4473 METKVLRFMLLLFLVLADDVTVKRTEAEICWSPSRSFKGLCLSSGKCARVCRTEGNTGGKCKGFLLRCHCSSTCCCGN 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03723 78 PANTHER DEFENSIN-LIKE PROTEIN 1 6 71 - -
Vian1g03723 78 SMART gth_4 29 74 IPR003614 GO:0006952
Vian1g03723 78 CDD Knot1 39 70 IPR003614 GO:0006952
Vian1g03723 78 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Vian1g03723 78 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Vian1g03723 78 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Vian1g03723 78 Gene3D - 27 74 IPR036574 -
Vian1g03723 78 Pfam Gamma-thionin family 29 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03723 Vian-Chr1 60101088 60101408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03723 1 74 Plant Defensins Gene Families AT2G02130 42.667 2.50e-14 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03723 - - gmx:102666433 75.0997