Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03718 ATGGAGAGAAAAACTTTCAGCTTCTTGCTCTTGCTCCTTCTTGTCTTAGCCTCTGATGTGGCCGTAGAGAGAGGAGAAGCTAAAACTTGTATGACAAAGAAAGAAGGGTGGGGAAGATGCTTAATTGATACCACCTGTGCACATTCGTGCAGGAAGCAAGGTTACAAGGGAGGCAATTGCAAAGGCATGAGGCGCACCTGCTATTGCCTCCTCGACTGTTGA 222 0.473 MERKTFSFLLLLLLVLASDVAVERGEAKTCMTKKEGWGRCLIDTTCAHSCRKQGYKGGNCKGMRRTCYCLLDC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03718 73 Gene3D - 28 73 IPR036574 -
Vian1g03718 73 PANTHER DEFENSIN-LIKE PROTEIN 1 5 69 - -
Vian1g03718 73 Pfam Gamma-thionin family 28 73 - -
Vian1g03718 73 SUPERFAMILY Scorpion toxin-like 28 73 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03718 Vian-Chr1 60059136 60059454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03718 7 73 Plant Defensins Gene Families AT2G02120 33.824 2.27e-13 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03718 - - vum:124832374 92.4337