Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03703 ATGAAGGTGAAGAAGGGTTGGCTTGCAGTTGAGGTAGAAGAAGAATCAGAAGAAGGTTTTGGCGAAGGCTCTCACAGATTTATGATTCCAATTTCGTATCTTTATCATCCTCTCTTCAAGAACCTTCTGGATAAGGCTTACGAGGTTTATGGCTACCACACCCAAGGTCCTCTCAAGCTTCCATGTTCAGTTGATGACTTTCTTCATCTCCGATGGAGAATCCACAAAGAAGCCACCACCCACCATCGCCATAACCATCTTCATCATCACCAACCTCATCGTCAACTTTCTAACTCCTTCTCTTTCCACTCTTGTTGA 318 0.4403 MKVKKGWLAVEVEEESEEGFGEGSHRFMIPISYLYHPLFKNLLDKAYEVYGYHTQGPLKLPCSVDDFLHLRWRIHKEATTHHRHNHLHHHQPHRQLSNSFSFHSC 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03703 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 70 IPR003676 GO:0009733
Vian1g03703 105 MobiDBLite consensus disorder prediction 86 105 - -
Vian1g03703 105 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03703 Vian-Chr1 59842157 59842474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03703 3 70 Calmodulin-binding Proteins AT3G43120 45.588 1.82e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03703 K14488 - gmx:100306557 155.606