Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03661 ATGGCTGTATCGAGATTGAAACCGGGGTTTCGGTTCCACCCCTCGGGTGTCGAGTTGGTTGTGTACTTTCTGAAAAGGAAAGTGATGGGGAAAAAGTTCTTTGGTGGTGCCATTGCTGAACTTGACATTTACAAATATGCTCCATGGGATCTCCCAGCTAAGTCTTGTCTAAGAACTGGGGAATTGGAATGGTACTTCTTCTGCCCACTGGAGAAGAAATATGGCAGTGGGAGTAGGATCAAGCGCGCTACTGAAATTGGGTACTGGAAAGCTACTGGGAGGGATAGAAGTGTTCAGTACAATAATAAAACGGTGGGGATGATTAGAACACTGATATTTCACAAGGGTAAATCGCCTAAAGGTGAACGAACTAATTGGGTTATGCATGAGCATAGGCTTGAAGATAAGGACCTTGCTGGCAAAGGAATTGCACAGAATTCCTATGTAGTCTGCAAGGTATTTGAAAAGGAAGGTCTTGGTCCCAGGAATGGGGCGCAATATGCAAGGCCATTTAATGAGGAAGAGTGGAGCGATGAAGAACTGGAAATCCCTTGTACTGCTTCAACTGCACCAGTTCCCATCTTGCCTATGACATCCGATGCTTCTGTCCCGAAGGACAATTCCGTCCCTGCTAGTGGATGTACATCATGTCTATCAAGATCAATGCCTTTACCTGGAACCGCGGATCCTTCTGATCCAAATGATCAAGTTGTTAACAATGATGATGAAGATATTTTACGGATGAATGATATTTCTGAAGATGGTGACAAATTGTTTGAGAAACCTGATAATGATCAAGAAAACATTGCTGGGGGTGTACCACCTTTAGCCGAATTATTCGTGGGCTTGGATGCCTACTTGGATGCTTATCATGCTGCTATATCCTCTGGCCAGAATGCTGAATTTAGCACAAACGGAATGGTTACTACAGATGATGTCTGGAGCTTGGACTTCATAGAGTTATCTGATCTAGACATCTCATTGGTCTAG 990 0.4394 MAVSRLKPGFRFHPSGVELVVYFLKRKVMGKKFFGGAIAELDIYKYAPWDLPAKSCLRTGELEWYFFCPLEKKYGSGSRIKRATEIGYWKATGRDRSVQYNNKTVGMIRTLIFHKGKSPKGERTNWVMHEHRLEDKDLAGKGIAQNSYVVCKVFEKEGLGPRNGAQYARPFNEEEWSDEELEIPCTASTAPVPILPMTSDASVPKDNSVPASGCTSCLSRSMPLPGTADPSDPNDQVVNNDDEDILRMNDISEDGDKLFEKPDNDQENIAGGVPPLAELFVGLDAYLDAYHAAISSGQNAEFSTNGMVTTDDVWSLDFIELSDLDISLV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03661 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 212 - -
Vian1g03661 329 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Vian1g03661 329 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Vian1g03661 329 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Vian1g03661 329 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Vian1g03661 329 MobiDBLite consensus disorder prediction 220 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03661 Vian-Chr1 59415149 59418110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03661 1 258 NAC Transcription Factor Family AT5G64060 52.075 4.94e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian1g03661 NAM 5.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03661 - - vra:106770001 654.44