Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03631 ATGAAAGGAAACAAGCCTTATCTAGTTGTCATCCTCATACAAGCCATCTACGCTGCTATGTTTCTGCTCTCAAAAGCAGCATTTGACCGTGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGACTGCAGCCACCATATTCCTCATCCCTTTCGCTTTCTTCTTTGAATGGAAAACTGCACCTCCTTTGTCTTTCGTGGCCTTCTGCAAGATCTTTTTACTTTCTTTTCTGGGGATCACTGCCAGCTTGGACATATATGGTATTGCCCTTGTTTATACTTCTGCTACTTTGGCTGCTGCTATCACAAACTGTCTCCCAGCCATCACCTTTTTCTTAGCGTTACTGCTCAGGATAGAAGTTTTGAAGGTAAAGAGTGCTCCTGGTGTTGCTAAGTTGGTTGGAGTAGTGGCATGCTTAACTGGAGCAGCAATCCTTGCTTTCTATAAAGGTCCTCATTTGGAGCTTTTAAGCCATTATAACCTTTTAGGGTACCATAAAAGCCACCAACACCTGGGTCATGTTGCATCTCGTTCATGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAGCACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTTTGTCATAAAAGACTACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCCATTCAGTCTTTGGGCATTGCCTTGGCAGTAGAAAGAGACATTGAACAATGGAAATTAGGGTGGAATGTCAGACTCCTTGCTGTTGCTTACTGTGGAATTATGGTGACTGGTGTAACATATTACTTACAAGCATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTGGCAATGGCAACACCACTGTCTCTCGTAATGACCATCATCTCCTCCACGTTTATCTTGGGCGAAATAATAACTTTGGGAAGGTTATTCATCAATCACCATCCTCATCCCAACTTTTACTTCTCTTTTCCTTTCTTATGTGTTTTACACATTCACCAAAATCATAGTTTCACACTCCAATACATACTCCCAATAACGAAGAAATCGAAAAATTGGAAAACAAACAGAAAAGTATGTGAGAAAAAAGGGAAAGAGAAGGCTAAATATTTAGTTTAA 1107 0.4128 MKGNKPYLVVILIQAIYAAMFLLSKAAFDRGMNNFIFVFYRQTAATIFLIPFAFFFEWKTAPPLSFVAFCKIFLLSFLGITASLDIYGIALVYTSATLAAAITNCLPAITFFLALLLRIEVLKVKSAPGVAKLVGVVACLTGAAILAFYKGPHLELLSHYNLLGYHKSHQHLGHVASRSWIKGCFLMLLSSTFWGMWLVLQTFVIKDYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVAYCGIMVTGVTYYLQAWVIEKKGPVFLAMATPLSLVMTIISSTFILGEIITLGRLFINHHPHPNFYFSFPFLCVLHIHQNHSFTLQYILPITKKSKNWKTNRKVCEKKGKEKAKYLV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03631 368 PANTHER WAT1-RELATED PROTEIN 5 306 IPR030184 GO:0016020|GO:0022857
Vian1g03631 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Vian1g03631 368 Pfam EamA-like transporter family 5 146 IPR000620 GO:0016020
Vian1g03631 368 Pfam EamA-like transporter family 182 306 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03631 Vian-Chr1 59060738 59064029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03631 1 254 Nodulin-like Gene Family AT5G64700 62.791 1.18e-97 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03631 - - gmx:100775854 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03631 1 59060738 59064029 Vian4g01108 4 17883932 17887401 PCT