Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03629 ATGGCAGAATCTGCAAAATCTCCACAAACTGAACTTCCTCACAGAGCTTTTGGGTGGGCTGCTACAGACACTTCTGGGACCCTTTCGCCCTTTCATTTTACCAGAAGGGAAAACGGCGTTGACGACGTCACCGTCCAGATTCTGTTTTGCGGGGTTTGCCATTCTGATCTTCACACTGTCAAAAACGACTGGGGTTTCACCACTTACCCTGTCGTTCCAGGGCATGAAATTGTTGGTGTTGTGACAAAAGTTGGAAATAATGTGAAATACTTTAAAGCGGGTGATAAAGTGGGAGTTGGTGTTATAGTGGAGTCTTGCAAGGAATGTGAATGTTGCCAACAGGATTTAGAGAATTACTGTCCCCGCCCTGTGTATACCTATAATTCTCCTTATTATGATGGGACACGAACCCAAGGTGGTTATTCTAACATTGTGGTTGTCAACCAGCGTTATGTGCTCCGATTTCCTGACAACTTACCCCTTGATGCTGGTGCTCCACTGCTGTGTGCGGGGATAACTGTGTATAGCCCTATGAAATATTATGGGATGACAGAGCCTGGCAAACATCTGGGAGTGGCAGGGCTAGGTGGGTTAGGCCATGTTGCAGTCAAAATTGGTAAGGCCTTTGGGCTGAAAGTTACTGTCATTAGTGGATCTCCAAACAAGGAAGCTGAGGCAGTTGACACACTCGGGGCTGATTCTTTCGTTCTTTCCTCAGACCCTGCAAAAATGAAGGCTGCTATGGGAACCATGGACTATATCATAGACACAATTTCTGCTGTTCATTCGCTGAGTCCACTGCTTGGTCTGCTGAAGCTGAATGGGAAGCTAGTTACTGTAGGGTTGCCTAACAAGCCTCTTGAGGTGCCTATCTTCCAAATAGCCGCAGGAAGGAAGCTTGTAGGGGGGAGCAACTTTGGAGGGATCAAGGAAACCCAGGAAATGCTTGATTTCTGCGGAAAGCACAACATAACTGCAAATATCGAGCTGATTAAGATGGACCAAATCAACACTGCCATGGAAAGGCTTGGAAAAGGTGATGTGAAATATCGCTTTGTGATTGATGTGGCCAACTCTTTCTCAAGTTTGTAG 1092 0.4625 MAESAKSPQTELPHRAFGWAATDTSGTLSPFHFTRRENGVDDVTVQILFCGVCHSDLHTVKNDWGFTTYPVVPGHEIVGVVTKVGNNVKYFKAGDKVGVGVIVESCKECECCQQDLENYCPRPVYTYNSPYYDGTRTQGGYSNIVVVNQRYVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISGSPNKEAEAVDTLGADSFVLSSDPAKMKAAMGTMDYIIDTISAVHSLSPLLGLLKLNGKLVTVGLPNKPLEVPIFQIAAGRKLVGGSNFGGIKETQEMLDFCGKHNITANIELIKMDQINTAMERLGKGDVKYRFVIDVANSFSSL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03629 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Vian1g03629 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 327 356 - -
Vian1g03629 363 Pfam Zinc-binding dehydrogenase 197 318 IPR013149 -
Vian1g03629 363 Gene3D - 170 326 - -
Vian1g03629 363 SMART PKS_ER_names_mod 26 354 IPR020843 GO:0016491
Vian1g03629 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 324 IPR036291 -
Vian1g03629 363 FunFam Cinnamyl alcohol dehydrogenase 170 326 - -
Vian1g03629 363 PANTHER ALDEHYDE REDUCTASE 10 359 IPR047109 GO:0016616
Vian1g03629 363 SUPERFAMILY GroES-like 23 188 IPR011032 -
Vian1g03629 363 Pfam Alcohol dehydrogenase GroES-like domain 41 153 IPR013154 -
Vian1g03629 363 FunFam probable cinnamyl alcohol dehydrogenase 19 178 - -
Vian1g03629 363 Gene3D - 19 356 - -
Vian1g03629 363 CDD CAD1 17 355 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03629 Vian-Chr1 59020476 59023577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03629 14 360 Monolignol Biosynthesis Gene Families AT2G21730 70.774 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03629 K00083 - gmx:100819684 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03629 1 59020476 59023577 Vian1g03629 1 59020476 59023577 ECH