Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03602 ATGGATTTCTTCTACTTTGGAAACCCAGACCCTTCTCATACTCATCTCCATAACATGTCTCCATCATCCCCTGAGATCGCACTCTCTGATTTCCTCCTTCTCGATGATTTCCTTCATCATCATCACGGAGACTCTCTATCATCTCAAAGCACTGAGTCGTCGGAAAAACCAACCTGTGACACCACTCACGGATTCACCACTGGTGCAACCTCTAAGAACAGCAACATCAACATAAAGTGCAAGAACGCGAATGGTGGAAGCAAAGCAAGGTTGGGTCCAAGAGTGGCATTCAGAACAAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAGTCCAAATTTAAGGAACTATTACAAATGTTCAAGTGGAGGATGCCTAGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGATTCCAGCTATGTGATAACAACGTATGAAGGTGTACACAATCATGAGAGCCCTTTTTCCACATACTACAGCCCTATCTCTTTTCTACATTCTGATCATTCTACATCTTCCAAATGA 561 0.4349 MDFFYFGNPDPSHTHLHNMSPSSPEIALSDFLLLDDFLHHHHGDSLSSQSTESSEKPTCDTTHGFTTGATSKNSNINIKCKNANGGSKARLGPRVAFRTKSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCLVKKRVERDREDSSYVITTYEGVHNHESPFSTYYSPISFLHSDHSTSSK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03602 186 SUPERFAMILY WRKY DNA-binding domain 98 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g03602 186 Gene3D WRKY domain 92 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g03602 186 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 169 IPR044810 GO:0003700
Vian1g03602 186 FunFam WRKY transcription factor 57 92 166 - -
Vian1g03602 186 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g03602 186 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g03602 186 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03602 Vian-Chr1 58718190 58719072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03602 8 181 WRKY Transcription Factor Family AT5G64810 45.556 6.92e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian1g03602 WRKY 2.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03602 - - gmx:100500248 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03602 1 58718190 58719072 Vian1g03602 1 58718190 58719072 ECH