Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03494 ATGTCCAAACCCTGGGGCAACATCGGAGCATGGGCCGCCGATTCCGAGCGGGCCGAGGCCGAGGAGCGCGAGGCCCAGGCTGCGGCCGCGGCCGCCGAGACCCAAAACTTCCCCAGCCTCAAGGAGGCCGTCAGCTCCAAGCCCAAAAAGAAGAAGGGTACAACCATCCCGCTCTCTCAGTTCAACCAGGGCGGCTTTCCCTCCGCCGGCGAGCACCAGGGCCTCACACGCGACGAGATGTTGGCGCTTCCCACCGGTCCCAAGGAACGGTCCCCCGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCCTCATACGACCGCTCCGCCGGTCGCTCTCGCGACCGCGACGGCGGAAACAACGACGGCTCCTGGGGTGGTGGCGGGAGAAGATCCTATGGCGGATTCGACGAGGAACGCAGGGGTTCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTGGACAATTGGGCCTCCGTGAAGAAATCTGTCCCCGCGTTTGATTCTGGTCGTCAGAATCGCTATGGGGGAGGCGGCGGCGGCGGCGGCGGCGGTTTTGGTGGCGGAGGTGGTGGTTTTGGTGGCGGCGGTTTTGGTGGTGCGTCTAGGGCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGGCTGCTCCTGTTAGATCTTCCAATTTTGGTTCAGGTTTTCGTGATTCGGGCGTGGAACCGGATCGTTGGTCGAGAGGTGGTCCGTCGCGTGAGACGGAGCGGACGGAGCGGCCGAGACTGGTATTAGATCCGCCGAGGGGCGATGGTTCGGTGAATGATGCTTCTGTGAAGGCGACAAACAAGGGCAATCCGTTCGGCGCGGCGAGGCCCAGGGAGGAGGTGTTGGCTGAGAAGGGATTGGACTGGAAGAAGATGGATTCAGAGATTGAGGCGAAGAAAACGAGCCGGCCCACGAGTTCTCACTCCAGCAGGCCTTCCAGTGCTCAGTCCAATCGCTCTGAGGGTCCCGCGTTGCAGGGGGTCGATGCTGTGCCGAAATCGAGGCCCAAGTTGAATCCGTTTGGGGATGCCAAGCCTCGGGAGATTCTGTTGGGTGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGATTTGGAGCATCGCTCTGTTGACAGATTAGGCAAATCGTATGGGCTAATATTCAGGCCTGAGACAATGGAGGAAAAATTGTTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAAGAGTCTCCAATAAATTCAAACAAGGAATCTGAGGGTGAAGCTGGTATAGACCAAACCAGTACATATGCAATATTACAACAGAAAGAAAAGGAGCTGGAAGCTCTTGTCCGTGATTTGGATGATAAAGTACGGTTTGGACAGAAAGCCGTTGAGAGGCCAGGTTCATCAGCAGGAAGATCTTCTGGTTTTTCTGATAGGCCACCTTCTAGATCTGGTTCATTTGAGGATTCTAGAAGCGTAGATTATACAGATAGACCTCGATCTCGTGGTACAGCAGGTACAGGAGATGTGTGGACCCGTCCTAGTGATGACAGAAGACAGTTTCAAGGTAGTCGGGAAAGGGGGTGGTTTTCTGGCAGCAGAGATTTGAATAGGTCAAATTCAAGAGAGCGTTGGCATTTGGAGCAACAATCATTGAGTACTGGCACAAACTTTTGCCTAATCTATATTAAATTATATTCCTTCAATTTTGCATCTGCACCATTGCCAAGTTTCAACCCGCTTTCCTCTCTACCTGTGAAGGGTGGTCAGAATTTAGCATTGTAA 1800 0.54 MSKPWGNIGAWAADSERAEAEEREAQAAAAAAETQNFPSLKEAVSSKPKKKKGTTIPLSQFNQGGFPSAGEHQGLTRDEMLALPTGPKERSPEEMQFNRLGGGFSSYDRSAGRSRDRDGGNNDGSWGGGGRRSYGGFDEERRGSNPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRYGGGGGGGGGGFGGGGGGFGGGGFGGASRADGVDNWAVGKKAAPVRSSNFGSGFRDSGVEPDRWSRGGPSRETERTERPRLVLDPPRGDGSVNDASVKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGPALQGVDAVPKSRPKLNPFGDAKPREILLGERGMDWRKIDLDLEHRSVDRLGKSYGLIFRPETMEEKLLKEEIDNLKKELEKESPINSNKESEGEAGIDQTSTYAILQQKEKELEALVRDLDDKVRFGQKAVERPGSSAGRSSGFSDRPPSRSGSFEDSRSVDYTDRPRSRGTAGTGDVWTRPSDDRRQFQGSRERGWFSGSRDLNRSNSRERWHLEQQSLSTGTNFCLIYIKLYSFNFASAPLPSFNPLSSLPVKGGQNLAL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03494 599 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 549 IPR010433 GO:0003743
Vian1g03494 599 MobiDBLite consensus disorder prediction 416 440 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 475 494 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 1 361 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 319 337 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 134 163 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 239 264 - -
Vian1g03494 599 Pfam Plant specific eukaryotic initiation factor 4B 1 533 IPR010433 GO:0003743
Vian1g03494 599 MobiDBLite consensus disorder prediction 292 318 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 464 546 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 52 69 - -
Vian1g03494 599 Coils Coil 440 460 - -
Vian1g03494 599 Coils Coil 13 35 - -
Vian1g03494 599 MobiDBLite consensus disorder prediction 426 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03494 Vian-Chr1 57495580 57501427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03494 1 550 Eukaryotic Initiation Factors Gene Family AT3G26400 55.342 1.51e-147 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03494 - - gmx:100784238 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03494 1 57495580 57501427 Vian1g03494 1 57495580 57501427 ECH