Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03463 ATGTGGGATGGTGACTGGACCGTGTTTTCACGTGAAACTGGCACCGTGATCCTTCAAACCGCTGGTGACTGGACCGTGTTTTCACGTGAAACTGGCACCGTGATCCTTCAAACCGCTGGTTCGTGTCATTCTTGCGATATGCAGTTGGACCTCGGTTTCTTTCGTATTCCGATAGTAACCCTGTCGGTCTTACTCTATTCTGGAACTGGAGACCTCTCTGTCTCGTTCCAAGCGTTCGTCCTCGTTCTGAAATTGTTAAAATTGAATGCAGACAAATGTATAATGATTGTAACTGTGGGAATGAAATTTTATGCTGCGGAGGTGCTGGTGGCGTTGGAGTATTTACACATGCTGGGAATCATATACAGAGATTTAAAGCCCGAAAACGTGCTGGTGAGATCGGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTTTGCTCGGATGCAATCCCAGCCGTTGAATCCTCAGATCCCTTATTACCTCACACTTACACTCACAGTTACACTCCCCCTCCCACTCGCTCGCATTCTTTTATCAGTCCATTCTCCTGCTTCTCGAACCGGGGTTTCCGGTCTCGTGACATGCGAGTCGTCGAACCGAACCGGCTCTTTGTAGCCGAACCGGTTTCGGCCCGCTCCTGCTCCTTCGTCGGAACCCACGAGTACGTCTCGCCAGAGGTTGCCTCCGGCAGGTCGCACGGGCTCAACCTGGCGCTGATTCGCATGCAGACGCCGCCCCTAGTTCCTAGCTCGAGAAGGACCAAAACGACGTCGCTGTACCCCGCGAAGGGGCTGCTCACAAAGACGAAGTCCAAGAGGAAGACCCAAGCCCTCGTCGCAATGGCTAAAGAGAAACAACAGCAGCAAGAAGAAGACTATCACAAGATGTTGCGTTCGTATTTAGGGCTCAGCTTCTCCATGTTTCTGGCCACGCTGGCAAACAACTCGGTACCGGCGCTTCAGGGGAAGAAACAGTGCATGGGTAGCATAAAACACTGTCACAGGGGTCAAATGGTGGAAAATCACTTTTGA 1038 0.5125 MWDGDWTVFSRETGTVILQTAGDWTVFSRETGTVILQTAGSCHSCDMQLDLGFFRIPIVTLSVLLYSGTGDLSVSFQAFVLVLKLLKLNADKCIMIVTVGMKFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDPLLPHTYTHSYTPPPTRSHSFISPFSCFSNRGFRSRDMRVVEPNRLFVAEPVSARSCSFVGTHEYVSPEVASGRSHGLNLALIRMQTPPLVPSSRRTKTTSLYPAKGLLTKTKSKRKTQALVAMAKEKQQQQEEDYHKMLRSYLGLSFSMFLATLANNSVPALQGKKQCMGSIKHCHRGQMVENHF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03463 345 Gene3D Transferase(Phosphotransferase) domain 1 99 306 - -
Vian1g03463 345 PANTHER FLIPPASE KINASE 1-RELATED 101 236 - -
Vian1g03463 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Vian1g03463 345 FunFam Serine/threonine-protein kinase OXI1 84 150 - -
Vian1g03463 345 ProSiteProfiles Protein kinase domain profile. 1 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03463 345 Pfam Protein kinase domain 100 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03463 345 SUPERFAMILY Protein kinase-like (PK-like) 102 236 IPR011009 -
Vian1g03463 345 SMART serkin_6 15 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03463 Vian-Chr1 57155190 57204309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03463 102 236 AGC Kinase Gene Family AT2G34650 66.667 6.14e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian1g03463 Pkinase 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03463 - - vun:114177159 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03463 1 57155190 57204309 Vian1g03463 1 57155190 57204309 ECH