Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03454 ATGGGAAATTTGCATTGGTCGCATAAACATTCACTGGTGCTCTGTTTGTTGGCAATGCTTCTAATACCTTCCTTGTGTCAAATTGAAGTAGCAACTGGTGTGTACATTGTTACTCTGAGACAAGCTCCTGCTTCTCACTACCATCATGAGTTGATCACAGTGGGTAACAAGTCTGTAAAGTCTGGACATGGTGCGTCTGGGAGAAGAAGAACTAGAATGCACAAACCAAGACATCAGAATGTTACAAAGGCAGATAAGGGATATGGTTCATACTTTGCCCGAGTTCATGACTCGTTGTTGAGTAAGGTCTTTAAGGGGGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTGGTTACCCAACAGCAGGCAGACAAACTTTCAAGGAGAAGAGAAGTTTCCAATGTGGTTTTGGATTTTTCTGTGAGGACTGCAACCACCCACACTCCACAATTTTTGGGGCTGCCACAGGGAGCTTGGTTTCAAGCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACTATTGGGTTTGTTGACACTGGCATTGATCCTACACACCCTAGTTTTGCTGATGATAAATCTCAACATCCTTTCCCTATTCCTGCTAATTTCTCTGGCGTCTGTGAGGTTACTCCAGATTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCAGACATTTTGCCGCTTCTGCTATAACCAGAGGAATATTCAACTCATCTCAGGACTATGCTTCTCCCTTTGATGGAGATGGCCATGGCACGCATACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCAGTGATCGTTGCTGGACAATTTTTTGGAAATGCTAGTGGGATGGCTCCTCATTCGCACATTTCCATTTACAAGGCACTATACAAGAGATTTGGAGGATTTGCGGCAGATGTTGTTGCAGCCATTGACCAGGCAGCTCAGGATGGTGTTGACATAATATGCTTGTCAATCGCTCCTAATAGGCGTCCTTCTGGTATTGCAACTTTTTTCAACCCAATTGATATGGCATTGCTGTCAGCTGTAAAAGCAGGTATTTTTGTAGTGCAAGCTGCTGGAAACACTGGACCATCACCTATGAGCATGTCCTCCTTTAGTCCTTGGATCTTTACAGTTGGTGCCACCTCTCATGATCGTGTTTATAGCAACTCCCTATGTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCCGGCACACATGAGAACACAATGTTCAAACTGATTCATGCACGACATGCTTTGAACAAAACCATAACAGTTGCTGATGCTATGTATATTGGTGAGTGTCAAGATGCAAGTATATTCAGTCACGATTTGGTTCAGGGCAACCTTTTGATCTGTAGCTATTCAGTCCGATTTGTGCTTGGGCTCTCCACCATCAAACAGGCCATGGAAACAGCCATGAACCTTAGTGCGGTTGGAGTTGTTTTCTCCATGGATCCTTTTGTGTCTTCTTTTCAGCTTAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCACTGGAAATAGATGGGGACTCTAATAAAATTGTTAAATTTGGGGCTGTTGCTAGTATTGGTGGGGGATTAGAAGCTAACTACAATAATGAGGCCCCAAAGGTTGTGTATTACTCTGCCAGGGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTATGAAACCCAATTTGGTAGCACCTGGAAATCTTATATGGGCTGCTTGGAGTTCTGTTGCCTCTGATTCTGTTGAATTTCTAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCTCTAGTTAAGAGAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCCACCTCAGCTTCTCTGTATGACAGCAATGGGAGGTCAATAATGGCTCAGAGATCATATCCTGCCACAGACCTTAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGCGGTTTTGTGAATGCTACTGCAGCATTAAATCCGGGATTGCTTTTTGATTCTAGTTATGATGATTACATGTCATTCCTATGTGGTATCAATGGTTCAACTCCTACAGTGCTAAACTACACCGGTCAAAATTGCTGGACTTATAACTCTACAGTTTATGGCCCTGATCTGAACTTGCCCTCAATCACAATAGCAATGTTGAACCAATCTAGAGTAGTGCAAAGAACAATCCAAAACATTGCTGAAAATGAAACATACAACGTTGGTTGGAGTGCTCCATATGGCGCTTCTATGAAAGTGTCTCCTAATCACTTCTCTATTGGCAGTGGGGAGAAACAAATCTTGTCTGTGATCTTCAATGCAACCAGCAACAGCTCTTCTGCCAGCTATGGGAGAATTGGGTTGTATGGTAACCAAGGTCATGTTGTCAATATTCCCGTAGCAGTCATTTTCAAAATCTTATAA 2535 0.432 MGNLHWSHKHSLVLCLLAMLLIPSLCQIEVATGVYIVTLRQAPASHYHHELITVGNKSVKSGHGASGRRRTRMHKPRHQNVTKADKGYGSYFARVHDSLLSKVFKGEKYLKLYSYHYLINGFAVLVTQQQADKLSRRREVSNVVLDFSVRTATTHTPQFLGLPQGAWFQAGGFETAGEGITIGFVDTGIDPTHPSFADDKSQHPFPIPANFSGVCEVTPDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGQFFGNASGMAPHSHISIYKALYKRFGGFAADVVAAIDQAAQDGVDIICLSIAPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLCLGNNVTIPGVGLAPGTHENTMFKLIHARHALNKTITVADAMYIGECQDASIFSHDLVQGNLLICSYSVRFVLGLSTIKQAMETAMNLSAVGVVFSMDPFVSSFQLNPVPMKMPGIIIPSANDSKILLQYYNSSLEIDGDSNKIVKFGAVASIGGGLEANYNNEAPKVVYYSARGPDPEDSLPHEADIMKPNLVAPGNLIWAAWSSVASDSVEFLGENFALMSGTSMAAPHVAGLAALVKRKFPNFSPAAIGSALSTSASLYDSNGRSIMAQRSYPATDLNLSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCGINGSTPTVLNYTGQNCWTYNSTVYGPDLNLPSITIAMLNQSRVVQRTIQNIAENETYNVGWSAPYGASMKVSPNHFSIGSGEKQILSVIFNATSNSSSASYGRIGLYGNQGHVVNIPVAVIFKIL 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03454 844 Gene3D Peptidase S8/S53 domain 179 713 IPR036852 GO:0004252|GO:0006508
Vian1g03454 844 Pfam Fibronectin type-III domain 746 839 IPR041469 -
Vian1g03454 844 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 182 193 IPR023827 -
Vian1g03454 844 SUPERFAMILY Subtilisin-like 152 704 IPR036852 GO:0004252|GO:0006508
Vian1g03454 844 CDD Peptidases_S8_3 152 659 IPR034197 -
Vian1g03454 844 MobiDBLite consensus disorder prediction 57 80 - -
Vian1g03454 844 Pfam Peptidase inhibitor I9 34 152 IPR010259 -
Vian1g03454 844 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 105 838 IPR045051 -
Vian1g03454 844 Pfam Subtilase family 177 662 IPR000209 GO:0006508|GO:0008236
Vian1g03454 844 MobiDBLite consensus disorder prediction 63 79 - -
Vian1g03454 844 ProSitePatterns Serine proteases, subtilase family, serine active site. 623 633 IPR023828 -
Vian1g03454 844 CDD PA_subtilisin_like 401 533 - -
Vian1g03454 844 Gene3D - 392 560 - -
Vian1g03454 844 Gene3D - 717 841 - -
Vian1g03454 844 PRINTS Subtilisin serine protease family (S8) signature 622 638 IPR015500 -
Vian1g03454 844 PRINTS Subtilisin serine protease family (S8) signature 257 270 IPR015500 -
Vian1g03454 844 PRINTS Subtilisin serine protease family (S8) signature 177 196 IPR015500 -
Vian1g03454 844 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 150 IPR037045 -
Vian1g03454 844 ProSiteProfiles Serine proteases, subtilase domain profile. 157 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03454 Vian-Chr1 57050213 57056104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03454 27 843 Subtilisin-like Serine Gene Family AT4G20430 67.805 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03454 - - gmx:100814065 1505.73