Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03451 ATGGATTTTTTCATGCAATCTCTGTTAATTACCGTGATCACCATGGTTGCAAGTGTGTATGTTTTGCAGAAAAGAAGAGCAGGTGGCACTAAAACCTTGCCCCCTGGTAGCTTTGGGTGGCCCCTGATTGGTGAAACCTACCAATTTTTGTTCATCAAGAGTGAACATTTCATTCGAGAGAGGGTCAAAAAGTACTCCTCACAGATCTTCCACACAAACATACTAGGAGAGCCAACAGTGGTTTTTTCTGGTCCTGCAGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTCTCAAAGTTTGGTACATGAAGACTCAGCGCAGGTTCTTCATTATTCCTGATCAAATACATGCACCAAACCTGAAATCAAAACAAGAAGCTGCATCTTCTGCTCCAGTGAAGATCTTGGGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGGAACAAAGTTGAATTAACCATGCATCAACATTTCATGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTGAAGGCCTTTACCCTCACACTGGTTTGTCAATTCTTCTTAGGCATTGATGAACCAAAATTGGGCAGTGAGTTTGAGTACTTGTATTTTGGGATCTACTCTGCTCCTGTGAATTTCCCGGGCTCTGCATACCGTAGGGCACTGAAGGCTTCAGCCGCAATAAGGAAAGAGATACAATTTCTGATCAAAGAGAAGATTGATGCTTTGTCCAAGGGGAAAATTGTGGATGACCTACTAGCACACGTAGTTGGTGCTGAGCAGGGTAGAAAATATGTGCCAAGAATTGAAATAAGCAACATCATCATGGGGATGATGAATTCCAGCCACATGCCAATAGCTATTACTCTGGCTTTCATGATCAAACACATTGGACAAAGGCCTGATATCTACCAAAAAATCGTATCCGAGCATGCTGGTATTACAAAATTCAAAAGATCTGGTGCAGCACTAGACTGGGACAGCCTACAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACTATGAGACTCTATCCAACTGCACCAGGTGTGTTCAGAGAGGTCATAACAGATATCACATATGAAGGTTTTTCTATTCCAAAAGGGTGGAAGATTTTTTGGTCACTGGTTGGGACAAATAGGGATCCCAACTACTTTCCTGAACCTGAAAGTTTTGACCCCTCAAGGTTTGAAGGAACTATTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGACAAGACTACACGCGGTTTGTGGTCCTCAATTTCATTCACATTCTAATAAACAAGTTCAAATGGGAAGTTACAGATCCTGATGAGAAAGTTTCAGGGGTTCTCATACCTACCCTAGCAGAGGGAGTATCTATCCGTCTTCATCACCACTAA 1419 0.4299 MDFFMQSLLITVITMVASVYVLQKRRAGGTKTLPPGSFGWPLIGETYQFLFIKSEHFIRERVKKYSSQIFHTNILGEPTVVFSGPAANKFVSTNETKLLKVWYMKTQRRFFIIPDQIHAPNLKSKQEAASSAPVKILGILKPEGIARYMGNKVELTMHQHFMTHWEGKTEVKVYPLVKAFTLTLVCQFFLGIDEPKLGSEFEYLYFGIYSAPVNFPGSAYRRALKASAAIRKEIQFLIKEKIDALSKGKIVDDLLAHVVGAEQGRKYVPRIEISNIIMGMMNSSHMPIAITLAFMIKHIGQRPDIYQKIVSEHAGITKFKRSGAALDWDSLQKLKYTWAVAQETMRLYPTAPGVFREVITDITYEGFSIPKGWKIFWSLVGTNRDPNYFPEPESFDPSRFEGTILPAPYTWIPFGAGPRSCPGQDYTRFVVLNFIHILINKFKWEVTDPDEKVSGVLIPTLAEGVSIRLHHH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03451 472 Gene3D Cytochrome P450 23 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS P450 superfamily signature 301 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vian1g03451 472 SUPERFAMILY Cytochrome P450 32 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03451 472 CDD CYP90-like 61 471 - -
Vian1g03451 472 PANTHER CYTOCHROME P450 26 31 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03451 Vian-Chr1 57008214 57010324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03451 32 375 Cytochrome P450 AT5G36110 33.611 3.63e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03451 K20667 - var:108321875 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03451 1 57008214 57010324 Vian1g03451 1 57008214 57010324 ECH