Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03439 ATGGCTCTGGGAAGAGGCAGTGCAGTAGTGCTATCACTCTCTCTCTGTTTCTTCCTGCTTCACTCTCACATGGCTCATGCTGCCACCTACACAGTCGGAGGTTCTAATCGTTGGACCTTCAACACTGTTGGCTGGCCCAAGGGCAAACGCTTTAGGGCTGGTGACACACTTGTGTTCAAATATTCCCCTGCAGTTCATAATGTGGTGGCGGTAAACAGGGCTGGGTATGATGGTTGCTCGACTCCAAAAGGGTCGAAAGTGTATCGTTCAGGGAATGATCAGATCAGACTTGCTAAGGGACAGAACTTCTTCATCTGCAACTTTGCGGGTCACTGTGAATCTGGGATGAAAATTTCCGTCAATGCTGTTTGA 372 0.4892 MALGRGSAVVLSLSLCFFLLHSHMAHAATYTVGGSNRWTFNTVGWPKGKRFRAGDTLVFKYSPAVHNVVAVNRAGYDGCSTPKGSKVYRSGNDQIRLAKGQNFFICNFAGHCESGMKISVNAV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03439 123 PANTHER BLUE COPPER PROTEIN 26 121 IPR039391 GO:0009055
Vian1g03439 123 Gene3D - 28 123 IPR008972 -
Vian1g03439 123 Pfam Plastocyanin-like domain 38 116 IPR003245 GO:0009055
Vian1g03439 123 CDD Plantacyanin 28 122 IPR041844 -
Vian1g03439 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
Vian1g03439 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Vian1g03439 123 FunFam basic blue protein-like 28 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03439 Vian-Chr1 56854296 56854813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03439 8 123 Phytocyanin Superfamily AT1G17800 37.190 3.26e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03439 - - gmx:100499869 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03439 1 56854296 56854813 Vian1g03439 1 56854296 56854813 ECH