Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03426 ATGGAGAAGTACGAGTTGGTAGAAGAGAACGTAGGGAATGGAAAAGTAGCAGTGGTGAAACTTATGCGTCACAGAGAGACCAAAGAACACGTTGCTGTAAAATTCATCCCACGGGACCTTACGGTAGCTCTGACTCCAACACATCTTGCATTAGTTATGGAGTATGCAGCCGGTGGAGAATTGTTTTACCAAGTTCTTTACCAAGGAAAAATCAAAGAAGACAACGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTGTTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCCAAGTCAAATCTACTTCATTCGAGGACTCATTCGATGGTAGGAACTCCAGCCTATATTGCACCAGAGATCATTTCTGGGAAAGATTATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAATTCTTTATACAATGCTTGTAGGAACATTGCCATTTGAGGACAAAAGTGATCGTCAAAATCTCAAAAAAATGGTTCAGAGAGTTTCGGCTGTTCAATACGAGTTTCCCGACAATGTTTTAAGCGAAGACAGCAAAAATCTAATATCTCGTATTTTTGTGGCAAATCCATCAAAGAGAATCACCATGAAGGAAATCAAGTCACATCCATGGTTTTTGAAGAACTTGCCTGAGGAGTTAACAGAAGAGGCTCAATGTGTCCACCACAATGAAGAAAATACAAAATATTGTGTTCAAAGTATAGAAGAAATCATGAACATTGTCAACGAAGCAAAAACCATACCTGTTGCTTGCAGTCCAAATCTATTAGGGGAATAG 813 0.3936 MEKYELVEENVGNGKVAVVKLMRHRETKEHVAVKFIPRDLTVALTPTHLALVMEYAAGGELFYQVLYQGKIKEDNEICHRDLKLENTLLDGSPANRLKICDFGYSKSNLLHSRTHSMVGTPAYIAPEIISGKDYDGKLADVWSCGVILYTMLVGTLPFEDKSDRQNLKKMVQRVSAVQYEFPDNVLSEDSKNLISRIFVANPSKRITMKEIKSHPWFLKNLPEELTEEAQCVHHNEENTKYCVQSIEEIMNIVNEAKTIPVACSPNLLGE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03426 270 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03426 270 Gene3D Transferase(Phosphotransferase) domain 1 1 263 - -
Vian1g03426 270 Pfam Protein kinase domain 75 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03426 270 SMART serkin_6 5 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03426 270 SUPERFAMILY Protein kinase-like (PK-like) 8 247 IPR011009 -
Vian1g03426 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Vian1g03426 270 PANTHER SERINE/THREONINE KINASE 2 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03426 Vian-Chr1 56740359 56743232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03426 15 221 CBL-interacting serine-threonine protein kinases AT5G25110 38.095 3.53e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vian1g03426 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03426 K14498 - gmx:100787825 379.793