Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03419 ATGGCAAATTCAAAGGGCTCATCAGGTTTCAGAAATTTTATGTATCCTGGAAAGCATGCTCTACTGCCTCCTAAAAGTCCGTTTCCTAGTGTTTCCCAAGCGTACTCTGATTATGTCCAAAATCCTGCTGTTGGTTTAAAGGGTGGTAACAGGCCTAGAGACGGAAATCCACACCACCAACGTACATCATCTGAGAGCCTTGTTATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTTAATGAGCCAGAAACACCTGTCCGAAGAGCTGGACATCGGCGTTCATCGAGTGATTCTTTTGCGTACCTAGACATGGCTAATGCATCTAACATCAATTATGCTGATCAGGACGAGTATAAATATAAGAGTTTGATGTCTATTCCGTCTTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCGCCATCTACCTGCTTATGTGGATATGAACTTATCTAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCAGTTGGTGTTCCCTCTGGCAAAGACAGTTCAGCTTTTCAGAGTTCAGGATTGCCAAGCACACCACAGGAAGCAGACGGGCTTGCACCTACTGCAACTGAAAAGCAAGATTCAGTAGAACCTGGATTGCAGGATGCAAAATCATTTTCTGAAAAAAAGGACAATTCACATGCAAAGTCATCTTCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAGCGTTCACGGGTTAGGAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGATCTGAAGTCTCAGCTGAGCTTGAGTTTCTTAATCAACAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCATTGTATCAGCAGCAGCAGCAGCCACAGACGCAGCAGCAGCAGCAGCCATCTAGTAGTCACAGACGCTCGAACAGCAGAGACCTCGAATCTCAGTTTGCAAACCTTTCTCTAAAACACAAGGATACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1128 0.4335 MANSKGSSGFRNFMYPGKHALLPPKSPFPSVSQAYSDYVQNPAVGLKGGNRPRDGNPHHQRTSSESLVIEEQPSWLDDLLNEPETPVRRAGHRRSSSDSFAYLDMANASNINYADQDEYKYKSLMSIPSWSSQDFDRSKDARHLPAYVDMNLSKQKNRSWDSFSNAMTNPVGVPSGKDSSAFQSSGLPSTPQEADGLAPTATEKQDSVEPGLQDAKSFSEKKDNSHAKSSSSETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEQEVLEREIGRLRALYQQQQQPQTQQQQQPSSSHRRSNSRDLESQFANLSLKHKDTNSGQDPALRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03419 375 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Vian1g03419 375 MobiDBLite consensus disorder prediction 215 242 - -
Vian1g03419 375 SUPERFAMILY Leucine zipper domain 236 290 IPR046347 GO:0003700|GO:0006355
Vian1g03419 375 MobiDBLite consensus disorder prediction 39 69 - -
Vian1g03419 375 Coils Coil 248 303 - -
Vian1g03419 375 MobiDBLite consensus disorder prediction 158 244 - -
Vian1g03419 375 MobiDBLite consensus disorder prediction 325 344 - -
Vian1g03419 375 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Vian1g03419 375 MobiDBLite consensus disorder prediction 351 366 - -
Vian1g03419 375 Gene3D - 236 290 - -
Vian1g03419 375 MobiDBLite consensus disorder prediction 158 191 - -
Vian1g03419 375 MobiDBLite consensus disorder prediction 325 375 - -
Vian1g03419 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03419 70 307 bZIP Transcription Factor Family AT3G58120 32.000 5.28e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03419 - - gmx:100813098 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03419 1 56652764 56656287 Vian1g03419 1 56652764 56656287 ECH