Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03410 ATGGGCAATACTTGTGTGTTGCTGAGAGATGCTGATCTCTTGAAGCTGAGCCACGTGGAGGACATAAACGCCGTCGTCATCACCCCCTTGTCGCGCTCCACCAGCACCTTCGATCGTTCCTCCGCCCCCTCCTTTGGACCTCAGCCGTTACCCTTGCCCAGAGCTATCAACTCTCGTTTACCCTTCTCCAAAGATGCTGTCGCCGAAAAACCCAATGTTGTCGTCGACAAACCCAATGCCGCCGTCGATTTTACCCTCCCCGTTGGTTTTCAAATGCGCATCTCGCGGAGAAAAAGCCCCAATGCCCATTCTTCTTCTTCTTCTCCTTCTCCATCCATACACTCCATTTTATCCCTTGACACCTCAATGGCACGTCGGGAAACCACTCTTCCTTACTCTGTCCATCCCTTACCCTTGCCTCCTTGGACTGGGCCTGGAGCTCCCATAGTCTCACCTCCTGCTATCTTTTCCCTTCCTGTTGCTAAGACGGAACCCTTCCCAATGAAAAATCAGTGGCAAAAAGGAAAACTTATTGGCAGAGGTACCTTTGGATCTACCATGTGA 564 0.5142 MGNTCVLLRDADLLKLSHVEDINAVVITPLSRSTSTFDRSSAPSFGPQPLPLPRAINSRLPFSKDAVAEKPNVVVDKPNAAVDFTLPVGFQMRISRRKSPNAHSSSSSPSPSIHSILSLDTSMARRETTLPYSVHPLPLPPWTGPGAPIVSPPAIFSLPVAKTEPFPMKNQWQKGKLIGRGTFGSTM 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03410 187 MobiDBLite consensus disorder prediction 95 115 - -
Vian1g03410 187 MobiDBLite consensus disorder prediction 97 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03410 Vian-Chr1 56485244 56488775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03410 113 185 MAP Kinase Kinase Kinase AT5G66850 45.205 3.51e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03410 - - var:108336761 170.629