Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03408 ATGGAGGTGACAAAGCTTGTAGTATTGCCAGCAGTTTTGGCATTCTTTGTCCTTTGCCTACATTTCATGACAAGAATGGCCAGACTGAGAAACCTGAATCTTCCTCCTGGAAGATTAGGGTGGCCTGTTGTTGGAGAAACCTTGGAGTTCATGCATGCAATGGTTGAGGGAAACGTGTTAAGGTTCCTGCAAGAGAGAGTGGAGAAATATGACTCAAGGGTGTTCAAGACATCAATGTTTGGAAATCCTGTTGCTGTGTTTTGCGGACCAGCTGGGAACAAGTTCCTGTTTAGCAATGAGAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCGGTGAGGAAGCTCTTAAGGTTGTCCCTTGTTACCAAGGTTGGTGATGAGGCAAAGATGGTGAGAAAGTTGCTCATGAACTTTCTTAATGCAGAAACACTCAAAAATTACTTGCCAAAAATGGATAGAATTGCTCAGCACCATATAGACACTTATTGGAAAGGAAAGGAGCAGGTTTTTGTCCATCCAATTGTAAAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGCACAAATATCAAAGTTTTCATTAAAATTTGATGCGTTTCTGAAAGGGATCGTTGGCTTCTCCCTCAACATTCCTGGAACAAGGTTTTATCGTGCAATGAAAGCTGCAGATGAAATAAGGAAAGAGATTAAAATGATTCTGGAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGAGCATCACCTACTCAAGACCTTCTATCACACATGCTTCTTACATCTGACCCAAGTGGAAAGTTTATGACCGAAATGGAGATTCTTGATAACATACTTCTGCTACTTTTTGCAGGCCATGATACTTCTAGATCAGTTTTATCATTGGTCATGAAATATCTTGGACAGTTGCCTCAAGTTTATGAACATGTCTTGAAAGAACAACTTGAAATTATTCGAGGGAAAGAGGTAGGGCAGTTGTTGCAGTGGGAAGATATTCAGAAAATGAAATACTCTTGGAATGTTGTATGTGAAGTCATGAGGTTGTCTCCACCAGTCAGTGGTGCTTATAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGCTGGAAGTTGCATTGGAACACTAATTCATCACACAAGGATCCAACAATCTTCTCGGATCCAGAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGGCCTACACCTTTTGCACATGTTCCATTTGGAGGTGGCCCCAGAATGTGTTTGGGCCAAGAATTTGCTAGACTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGAATTGGTGATTCCTGATGAAAAGTTGAAGTATGATCCCATGCTAGAACCAGTAAAGGGACTTGAAATTCGACTTCATCCTTCTAGTTCATAG 1437 0.4071 MEVTKLVVLPAVLAFFVLCLHFMTRMARLRNLNLPPGRLGWPVVGETLEFMHAMVEGNVLRFLQERVEKYDSRVFKTSMFGNPVAVFCGPAGNKFLFSNENKNVQVWWPSSVRKLLRLSLVTKVGDEAKMVRKLLMNFLNAETLKNYLPKMDRIAQHHIDTYWKGKEQVFVHPIVKLYTFELACCLFLSIEDSAQISKFSLKFDAFLKGIVGFSLNIPGTRFYRAMKAADEIRKEIKMILEKRKVDLEEKRASPTQDLLSHMLLTSDPSGKFMTEMEILDNILLLLFAGHDTSRSVLSLVMKYLGQLPQVYEHVLKEQLEIIRGKEVGQLLQWEDIQKMKYSWNVVCEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTNSSHKDPTIFSDPETFDASRFEGAGPTPFAHVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVIPDEKLKYDPMLEPVKGLEIRLHPSSS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03408 478 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PANTHER CYTOCHROME P450 26 31 461 - -
Vian1g03408 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Vian1g03408 478 SUPERFAMILY Cytochrome P450 28 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 FunFam Taxadiene 5-alpha hydroxylase 25 476 - -
Vian1g03408 478 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 CDD CYP90-like 66 475 - -
Vian1g03408 478 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g03408 478 Pfam Cytochrome P450 35 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03408 Vian-Chr1 56464153 56467430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03408 33 380 Cytochrome P450 AT5G36110 44.729 9.70e-104 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03408 - - gmx:100778139 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03408 1 56464153 56467430 Vian1g03408 1 56464153 56467430 ECH