Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03351 ATGAAGTGGGGTGGAAAAAAACCTTCTCCTTCTCCTTCTTCCTCTTCTAGGCCTTCTTTTGCATCTCATGTGTCTCCTTTTTCATGGCTTTCCAAGTTCAAGCATATGAGAATAAACTCAGACCCAAAACCTGCCGCACTGAAGCAAAATGCAAAGCAGAATTCTACTCCATCAGATACCTCGCCCCATTATGCTTGTGGGAATAATAGAGGCAGGTTTTATGGAGGGGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGGGTAATGAGCATAGAAAAAGTGATGATATTCTGAAGCCGGTAAAGTACAAATTGGATGCTGAACATGTCATTCCATCCTCGAGTTTCCCCGGTGGATTGAATAATGCTAAAAGACAAGGTAGAAGAGAAGTCACTCAGAAGTTGAAGCAGAAGGACACTGAACTGAGAGAAGAAACAACATTGCTGAATGAAGCTGCAAGGAGTGTAAAAGAACTCGAATCCTTGAGGAGGCGATATGAGAGGAAAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAATTGGAAAAGGCAGAAGAGGAATCTCAGTTTGCATCAAGTCCGTTCTTAGAAAATGATGTGCAGCAATATGAGTCACCCAGAACAATTTGCACACCAAGGAAGCATTTGTTTGTCGATTCAAAGAGTTCTGGCCTTGGGTATCTAAGAGAAGCCCGAGTAAGTAGTCCCCAATTGGATTCTGAGTTGCATAATTTGAAACAAACTGAGGAGTTGAAATTGAAAGCAAAGAGTAACCAACAAATGCAATCGCTTCATGTGAGCAGAGAAAACCCGAGGAGGAAACCAAAGCACAACTCCAAGGTTAGAGTACATTCTCCAAGAATGGGTTCCAAAGTTGAAGTCCGAAAAATAAAGGCAATAGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAAAAAGAAGAGGAAATTGTGGAGGAAACAGAAGGGTTAGATAGCTTTGCGGTGGTGAAATGTTCTTTGGATCCACAGAAGGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAATCAGCCAGAAGAAATGCAAGATCTGCTAGCATGTTATCTGACTTTGAATTCTAATGAGTACCATGATCTCATCATCCAAGTGTTCAAACAAGTATGGTTGTGCATGAGCCGAGCCAGTTCGGGTATTCAATCACACAAGCAATGCTGTTGTTGTGATTAA 1224 0.4142 MKWGGKKPSPSPSSSSRPSFASHVSPFSWLSKFKHMRINSDPKPAALKQNAKQNSTPSDTSPHYACGNNRGRFYGGDDEAFWRLSFGEEGNEHRKSDDILKPVKYKLDAEHVIPSSSFPGGLNNAKRQGRREVTQKLKQKDTELREETTLLNEAARSVKELESLRRRYERKAQRVLQEQLLKLEKAEEESQFASSPFLENDVQQYESPRTICTPRKHLFVDSKSSGLGYLREARVSSPQLDSELHNLKQTEELKLKAKSNQQMQSLHVSRENPRRKPKHNSKVRVHSPRMGSKVEVRKIKAIEEKKKAKLKMKKEEEIVEETEGLDSFAVVKCSLDPQKDFRDSMIEMITEKQINQPEEMQDLLACYLTLNSNEYHDLIIQVFKQVWLCMSRASSGIQSHKQCCCCD 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03351 407 Coils Coil 144 189 - -
Vian1g03351 407 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Vian1g03351 407 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 195 391 IPR038933 GO:0045892
Vian1g03351 407 MobiDBLite consensus disorder prediction 272 286 - -
Vian1g03351 407 NCBIfam uncharacterized plant-specific domain TIGR01568 329 389 IPR006458 -
Vian1g03351 407 MobiDBLite consensus disorder prediction 1 23 - -
Vian1g03351 407 MobiDBLite consensus disorder prediction 40 70 - -
Vian1g03351 407 MobiDBLite consensus disorder prediction 46 65 - -
Vian1g03351 407 MobiDBLite consensus disorder prediction 255 290 - -
Vian1g03351 407 Coils Coil 298 325 - -
Vian1g03351 407 MobiDBLite consensus disorder prediction 8 23 - -
Vian1g03351 407 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03351 Vian-Chr1 55675783 55677006 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian1g03351 Ovate 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03351 - - gmx:106798868 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03351 1 55675783 55677006 Vian1g03351 1 55675783 55677006 ECH