Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03342 ATGGTCTCTCCAAGCGTGGTGGTTTTGGTGGATAGCAAGGGGTGGGCAGATATGGCTACAACAGCAGCCTCGTCGTTCCGACACGGCGTCGTGAGCAATTTGGAGTACTACTCGATGATGTTGGAGTCGCTGTATGTGTCAACGGCTGGGGGAGGAGGGGAGTGGGTGAGGAGAATCGAGATGATGCAACTGCGACCGAAGCTCACCAGCAACAAAGGAACACAAAACCTTGCCTCGTTCCCGGAGAGTGGGTCCCGGGGAGCAGCGAAAAATACCTCCGGCGCAAAGAAAGGCATGTGA 300 0.5567 MVSPSVVVLVDSKGWADMATTAASSFRHGVVSNLEYYSMMLESLYVSTAGGGGEWVRRIEMMQLRPKLTSNKGTQNLASFPESGSRGAAKNTSGAKKGM 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03342 99 MobiDBLite consensus disorder prediction 68 99 - -
Vian1g03342 99 MobiDBLite consensus disorder prediction 68 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03342 Vian-Chr1 55606998 55607870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03342 2 70 GRAS Transcription Factor Family AT4G36710 48.571 3.25e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian1g03342 GRAS 5.6e-05 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03342 - - gmx:100807470 109.768