Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03339 ATGGGAAGTGAAGAAGTGAAGGTGGTGAGCTTTTGGGTGAGTCCATTTGGGAAGAGGGTGGAGTGGGCCTTGAAGCTGAAGGGAATAGAATATGAATACATAGAAGAAGATATCTTCAATAAGAGCAATCTCCTTCTCCAGTTGAACCCGGTTTACAAGAAGGTTCCGGTTCTGGTCCATGCCCACAAACCCATCGCTGAATCATTCATCATCCTTCAATACATTGATGAAATTTGGAAGCAGTATCCACTGCTGCCACAACATCCTTATCAAAGAGCACTTGTTCACTTTTGGGCCGATTTTGGTGAGCGAAAGCTTTTGGATACATCATGGGTTGCAATGTGCAGCAGCGGGGATGACAAGGAAGAGGCTCTGAAAGTAGCTAGAGAAGCAATGGAGAAGATTGAAGAAGAGATAAAGGGGAAGAAGTTTTTTGGAGGAGACAACATCGGGTACCTTGACCTTGCCCTTGGATGGATCTCTTACTGGCTTCCTGTTTTTGAGGAAGTTGGATCCATGCAGATAATGGACCCACTGAAATTTCCAGCCACCACTGCATGGATCACCAATTTTCTGAGCCACCCTGTGATCAAGGACAACTTGCCCCCAAGAGACAACATGCTTGTTTACTTCCACAGCCGCAGAAAGGCACTTTCTTCATCTTTTCAGGGTTGGTTCAAGGTTTAG 687 0.4556 MGSEEVKVVSFWVSPFGKRVEWALKLKGIEYEYIEEDIFNKSNLLLQLNPVYKKVPVLVHAHKPIAESFIILQYIDEIWKQYPLLPQHPYQRALVHFWADFGERKLLDTSWVAMCSSGDDKEEALKVAREAMEKIEEEIKGKKFFGGDNIGYLDLALGWISYWLPVFEEVGSMQIMDPLKFPATTAWITNFLSHPVIKDNLPPRDNMLVYFHSRRKALSSSFQGWFKV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03339 228 Gene3D - 85 222 - -
Vian1g03339 228 FunFam Tau class glutathione S-transferase 85 221 - -
Vian1g03339 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Vian1g03339 228 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vian1g03339 228 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Vian1g03339 228 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Vian1g03339 228 SFLD Main (cytGST) 2 220 - -
Vian1g03339 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vian1g03339 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Vian1g03339 228 CDD GST_N_Tau 6 79 - -
Vian1g03339 228 Pfam Glutathione S-transferase, C-terminal domain 120 195 IPR004046 -
Vian1g03339 228 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vian1g03339 228 Coils Coil 118 138 - -
Vian1g03339 228 Gene3D Glutaredoxin 1 84 - -
Vian1g03339 228 FunFam Tau class glutathione S-transferase 1 87 - -
Vian1g03339 228 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03339 Vian-Chr1 55595210 55596324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03339 2 219 Glutathione S-transferase Gene Family AT2G29420 42.202 4.27e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03339 K00799 - tpra:123914566 380.563