Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03326 ATGGCATTGAGAGATACGATAAGATCTGGTTGGAAATTGGACATAGTATGTGGCTGGGCATTTTGTAGGACAAGAATCCAAGCTGCATCCCATCATTACCTTCAAAGGAAAGCATGCACATGCTATGCTATGCTTAGACCATGTGTTTACGAGAACTCCAATAGTTCCACCCAAAAGATGCCTGTCACTCACAAACAAAAAGCTCAAGTGAGGAGGGTACGAGAACCTGAACAAAACATGAAGAACATTACTTGTTCCGGGGCATCCGTCACACAATACTTCTTCCTTTTGGGGATCCAATACACCTCAGCCACATTTGCCTGTGCATTTGTCAATATGGTGCCGGTGATAACCTTCATCATGGCATTGCCATTTGGGCTAGAAACAGTGAACATTAAATGCTTGGGTGGGAAAGCGAAGATTCTGGGCACATTTGTGTGTGTAGGAGGGGCATTAGTGTTGACACTTTACAGAGGAAAACCCTTGTTTGATGTGTCTCACTATAAAGCAACGGTTCCTCCGGTAGCCATGAGATCTGAAGGTGGTTCTAGTGGTAGAACAGCACAGAAATGGAGCATTGGTGTAATAGCTTTGATGATGGGAACCCTGTTTTGGTCTTTTTGGTTTATTCTACAGTCAAAGATAGGGAAGAGGTATCCTTGCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACTGGCACCAACTTCTCCTCCTGGATTCTCAAGGATAAGATGCAAATAATCACTGTTCTTTATTCTGGGATAGTTGGGTCAAGTATGTGCTACGTGGGGATGTCATGGTGCGTGAAGAAGAGGGGTCCAGTCTTTACAGCAGCATTCAGCCCTCTGGTTCAGATAATGTCGGGCATGATTGATATCCCAGTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGCTCCGTCTTGGTCATGATCGGCTTGTACATTCTCCTTTGGGGCAAAACCAAGGACATAATGCAGAATACTGCCACTAAGTTGCTCCAAGAAACTCAGCAAACCAAGGAACAAGAACCACAAGTATAA 1083 0.4497 MALRDTIRSGWKLDIVCGWAFCRTRIQAASHHYLQRKACTCYAMLRPCVYENSNSSTQKMPVTHKQKAQVRRVREPEQNMKNITCSGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCLGGKAKILGTFVCVGGALVLTLYRGKPLFDVSHYKATVPPVAMRSEGGSSGRTAQKWSIGVIALMMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGLSTGTNFSSWILKDKMQIITVLYSGIVGSSMCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPVLHEQLHLGSVVGSVLVMIGLYILLWGKTKDIMQNTATKLLQETQQTKEQEPQV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03326 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 89 158 - -
Vian1g03326 360 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vian1g03326 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 335 - -
Vian1g03326 360 PANTHER WAT1-RELATED PROTEIN 85 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03326 Vian-Chr1 55382198 55387816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03326 87 359 Nodulin-like Gene Family AT1G01070 40.925 4.53e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03326 - - gmx:100791663 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03326 1 55382198 55387816 Vian6g01657 6 34125997 34128251 PCT