Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03294 ATGGCTTCTCCCGGTGGAGCCTGTTCATCCGGTTCCAGTTCTCTTCAAAACTCTGGCTCCGAGGGCGACCGAGACATGGTGGATCAGAGGAAGAGAAAGAGAATGCAATCGAACAGGGAATCGGCACGCAGATCTCGCATGAGGAAACAGCAGCACCTGGAAGGTTTGAGTGCCCAATTGGATGAGCTGAAAAAGGAGAACAATGAAATGAACAGGAACATAGGCATGACGACGCAGGTGTACCTGAAGGTGGAAGCTGAGAACGCGATTCTGAGGGCGCAGATGGCGGAACTCAGCAACAGATTGAACTCTCTGAACGAAATCATCGGTTTCATAAACTCCACGAACTACTTGGTGTTCGATGAGGCACAGGAGACTCAGATGTTCAATGATTGTGGCTTCATGGATGCTTGGAGTGGAATACCCTTCAACCAACCAATCATGGCTTCCGCCGACAATGACATCTTGATGATGTATTGA 480 0.4938 MASPGGACSSGSSSLQNSGSEGDRDMVDQRKRKRMQSNRESARRSRMRKQQHLEGLSAQLDELKKENNEMNRNIGMTTQVYLKVEAENAILRAQMAELSNRLNSLNEIIGFINSTNYLVFDEAQETQMFNDCGFMDAWSGIPFNQPIMASADNDILMMY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03294 159 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Vian1g03294 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Vian1g03294 159 MobiDBLite consensus disorder prediction 1 22 - -
Vian1g03294 159 MobiDBLite consensus disorder prediction 1 64 - -
Vian1g03294 159 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Vian1g03294 159 Gene3D - 28 83 - -
Vian1g03294 159 Pfam bZIP transcription factor 30 77 IPR004827 GO:0003700|GO:0006355
Vian1g03294 159 FunFam BZIP transcription factor 28 79 - -
Vian1g03294 159 CDD bZIP_plant_GBF1 31 79 IPR045314 GO:0003700|GO:0006355
Vian1g03294 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 154 - -
Vian1g03294 159 Coils Coil 46 108 - -
Vian1g03294 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 74 IPR004827 GO:0003700|GO:0006355
Vian1g03294 159 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03294 Vian-Chr1 54913509 54913988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03294 26 152 bZIP Transcription Factor Family AT4G34590 48.571 5.12e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian1g03294 bZIP_1 1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03294 K25786 - gmx:778139 231.106