Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03251 ATGAACCATGGGTACATTGTTTATGATTTGGTTATGATCACTCTATCCTTGTCCCTCATAATTCTCGGTGTTGTCCTCTTTGTTGCATGCAAGAAGAAACCAGTTGAGAGTGAAGAAACTGTTGCTGTGAAGCACTGTGCTAGAGTGTACTCACTGATGGACATTGATGCTGTCACTGATAACTTCAACCACAGGAGAGTAGTGGGAAAGGGTCCTCTGGGAACCGTGTATGTTGGGGTGCAAGAGAATGGAGAGCTTGTGGCTGTGAAAAGGATCCATCCCGTGCTTGTGTTGAGCAACGCAGGGTTAGGATTCTCATCAGTGTTGAAATGGCTCTCTTCAGTGCAACATCCCAACATAGTTCCTATAATTGGATTCTCAGAAGCACCGGGTGAAAGAGTTATAGTGATGGAGTTTGGGCGCATGATGAGCTTGGAGTTCTGTTTGCATCAAAACGTTAATGGGGCATCACTTTTGGATTGGAACAAGAGGATCAGAATTGCAGCAGGAACAGCGAGAGGGCTTCAGTATTTGCATGAAGTGGCAACACCAAACATCGTACATGGGCGAGTCAAGTCTTCAAATGTTTTAATTGATGTCAACTTTTGTCCTAGGATTTGTGATTATGGTCTCAACTTTTTGGCAGCAGGAGAAAAGAGAGAGCTAGTAGGTTATGTGGATGATGAGTATTGGAATGAAAGAGGGGGTGGTGGAAGCAAGGAAAGTGATGTTTATGGTTTGGGAGTTGTATTGCTTGAGCTAATAAGTGGTAGAGGATGCAATGAAGGAATGATAGTAGAGTGGGGTTTGCCTTTGATAAAGGCATTGGGTTTTGGTGAAGTTTTGGATCCTAGGTTGGTAATTCCTTCTGATATGAAGAATGTAGTTAGATTAGCCAAAGTTGCTTCGGCTTGTGTTGGTAATTCAAGAAAGTGTAGACCTTCCATAGCACAAGTGGCTACTATTTTGAACAATTTAGAGATGGAAGTGTGCATTTCTGATCTGTAA 1008 0.4276 MNHGYIVYDLVMITLSLSLIILGVVLFVACKKKPVESEETVAVKHCARVYSLMDIDAVTDNFNHRRVVGKGPLGTVYVGVQENGELVAVKRIHPVLVLSNAGLGFSSVLKWLSSVQHPNIVPIIGFSEAPGERVIVMEFGRMMSLEFCLHQNVNGASLLDWNKRIRIAAGTARGLQYLHEVATPNIVHGRVKSSNVLIDVNFCPRICDYGLNFLAAGEKRELVGYVDDEYWNERGGGGSKESDVYGLGVVLLELISGRGCNEGMIVEWGLPLIKALGFGEVLDPRLVIPSDMKNVVRLAKVASACVGNSRKCRPSIAQVATILNNLEMEVCISDL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03251 335 Pfam Protein kinase domain 63 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03251 335 FunFam Receptor protein kinase CRINKLY4 141 330 - -
Vian1g03251 335 SUPERFAMILY Protein kinase-like (PK-like) 40 323 IPR011009 -
Vian1g03251 335 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Vian1g03251 335 FunFam serine/threonine-protein kinase-like protein ACR4 29 139 - -
Vian1g03251 335 Gene3D Phosphorylase Kinase; domain 1 25 139 - -
Vian1g03251 335 ProSiteProfiles Protein kinase domain profile. 62 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03251 335 PANTHER OS01G0253100 PROTEIN 40 327 - -
Vian1g03251 335 PIRSF ILK 31 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03251 Vian-Chr1 54095702 54096709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03251 47 324 Receptor kinase-like Gene Family AT3G59420 39.041 8.91e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vian1g03251 Pkinase 7.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03251 - - gmx:100809726 549.28