Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03248 ATGGAGTCGCGAGTGCTGTCACGCGCCGGAGCCTTCTCCTCCCTCGCTCACCTCCGCAAGTCTCCGCGGGACGTCGCTGGCGGTGCCTCCTTCGTCACGGTGAAGACCGTGGGGTCCCTTGCGGAAGGTGGGAATCTGATTTGGGGGAGGCAGCTGCGTCCGGAGCTCTGCTCGCCGGCGCTGAAGAAGGAGGCCGTCCTCCTCCGACCTTGCCTTGCCGCCACCTCCTCACCGGCCGAGGGTGGTGATTCCGCCGGGGAAAAGGTTGCTCCCGCGGGATTCTTCGACAAATACCCCGCTCTTGTCACAGGGTTTTTCTTCTTCACGTGGTACTTCTTGAACGTGATTTTCAACATCCTCAACAAGAAGATCTACAACTATTTCCCCTATCCGTACTTCGTATCCGTCATCCATTTATTCGTCGGTGTGGTGTACTGTTTGGCGAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCTATAGACTCCAACCTGCTGAAGTTGCTCATTCCGGTGGCTGTGTGCCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACGCATACCATTAAAGCTCTTGAACCATTCTTCAATGCTGCTGCTTCACAGTTCATCCTTGGCCAATCCATTCCCATCACTTTGTGGCTGTCTCTTGCTCCCGTTGTTATTGGTGTGTCCATGGCATCTTTGACCGAGCTCTCATTCAACTGGGTTGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTCACCTACCGGAGCATCTATTCAAAGAAAGCCATGGTTATCTCCTATGCTACCCATACTGATATGGATAGTACCAATATCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCTCCTGCAGTAATTGTGGAAGGCCCTGCTCTGTTGAAGCACGGCTTCAATGATGCTATTGCTAAAGTAGGTTTGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGGATGTTTTACCATCTCTACAACCAGGTGGCTACCAACACTCTTGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGGAACGTACTGAAACGTGTATTTGTGATTGGATTTTCAATTATAGTCTTCGGTAACAAGATTAGCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGAGTGGCACTCTACTCTCTCATCAAAGCCAGGATGGAGGAAGAGAAACGATCTTGCCGTCTCGACTGA 1239 0.5061 MESRVLSRAGAFSSLAHLRKSPRDVAGGASFVTVKTVGSLAEGGNLIWGRQLRPELCSPALKKEAVLLRPCLAATSSPAEGGDSAGEKVAPAGFFDKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMVISYATHTDMDSTNIYAYISIIALIVCIPPAVIVEGPALLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSLIKARMEEEKRSCRLD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03248 412 PANTHER SOLUTE CARRIER FAMILY 35 104 403 - -
Vian1g03248 412 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 406 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vian1g03248 412 Pfam Triose-phosphate Transporter family 102 396 IPR004853 -
Vian1g03248 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 328 398 - -
Vian1g03248 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03248 Vian-Chr1 54048167 54052477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03248 1 412 Antiporters AT5G46110 76.066 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03248 K15283 - gmx:732611 726.087