Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03242 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCTAAACGCCAATACACGCTTCAGCATCACCATCAGAATTCTCATTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCTTGCCCCTATTGCTATGAAGACTTTGACATCGCGTCTTTGTGTTCTCATCTTGAAGACGAACATTCTTGCGAAGCCAGAGTCACGATTTGTCCTGTATGCTCTGTTAAAGTTGCAAGGGACATGTTAAGTCACATAACGCTGCAACACGGGCACTTATTCAAGGTACAGAGAAGACGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACACTGTCTCTCTTGGGTCGAGATCTTCGTGAGGCTCATCTACAGGTGCTTCTTGGTGGTGCTGGCGGAGGATACCGGTCAAACAGTGCAGCAGTGTCTAATGTTGCTACTGATCCCTTTCTATCCTCATTTATTTTGAATTTCCCAGCCTGTGAAGCAGAAGAGATTTCAAAATCTGTGGTGACAACTGCTGAGGATTCTTCTGCAAAAAATGTGACACCTGAACACATTTGGAAGTCAAGTTTTGATCCCTCCTTGAGCAGCGAAGAGCGGGAGAAAAGGATGAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTTTGTTAGGCGACTAA 702 0.4601 MDSDFWTSRLAAAKRQYTLQHHHQNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCEARVTICPVCSVKVARDMLSHITLQHGHLFKVQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGAGGGYRSNSAAVSNVATDPFLSSFILNFPACEAEEISKSVVTTAEDSSAKNVTPEHIWKSSFDPSLSSEEREKRMRQAAGRSGFVQDLFLSTLLGD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03242 233 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Vian1g03242 233 SUPERFAMILY TRAF domain-like 46 123 - -
Vian1g03242 233 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 231 IPR033347 -
Vian1g03242 233 Pfam Stress-induced protein Di19, C-terminal 119 230 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03242 Vian-Chr1 53951366 53953922 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vian1g03242 Di19_C 6.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03242 - - gmx:100792230 424.861