Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03150 ATGGCATTGGCAAGGATTGCTAGGGCCAACTTCAGAAAATCAAGAGGTGCTTATGGTAGTTATGCGAGTGAGAAGGATTTATTCAAAGTGGGAGGATACACAACCATACGGGACACAACTTCCCATGTAAATTTCAATTCAGATGAGAAGTTTTCATATGTTCCAACAAATAAGGAACATAACTGCGTGAACTTTGCAATGAGGGGAATATCAGGAACTCCATACCATCAGTTTCCTTCTGCTAACGCACAGACGGTTGTTGAGGAGTCAGAGTCAGAGTTGGAGAATGATCAGCGTAGATATGCAGGACTAGAGGCAACAAAGCCAGGTGAAAAGCCTAGGGTGGTTGTTCTTGGTACGGGTTGGGCTGCGTGTCGCTTCCTCAAAGGGCTTGACACCAAAATCTATGACGTTGTGTGTATATCACCAAGAAATCACATGGTTTTTACTCCTTTGCTGGCTTCAACATGTGTTGGAACCTTGGAATTCAGAACTGTTGCTGAGCCTGTCACCAGAATACAAGATGCATTAGCGAAAGACCCCAACTCCTTCTTCTTTTTAGCTTCTTGCACAGGCATCGACACTGGAAAACACGAAGTCTATTGTGAGGCAGTCAACAATGGTGAATTGCCCCGAGAGCCTTACGAATTTAAAGTCGCGTATGACAAGCTTGTCATTGCAGCAGGAGCCGAGGCTTTGACTTTTGGTATCAAGGGAGTAGAGGAAAATGCCTTTTTTCTTCGTGATGTGAACCATGCTCAAGAAATAAGGAAGAGACTTCTCCTGAATCTGATGCTTTCAGAAAATCCAGGCATATGGGAACAAGAAAAGAAACGCCTTCTACACTGTGTAGTTATTGGAGGTGGCCCTACAGGAGTGGAGTTTAGTGGTGAATTGAGTGATTTCATCACCAGGGATGTTCATGAGCGTTATACTCATGTCAAAGATTACATTCACGTTACACTAATTGAGGCAAATGAGATACTGTCATCCTTTGATGTTAGCCTACGGCAATATGCAACAAAGCACTTAACAAAGTCTGGTGTCCGTCTTAAGCGTGGTGTAGTGAAGGAAGTGCATAGCAAAGAGATAATTCTGAGTGATGGAACAAAAGTTCCTTATGGCCTCTTGGTCTGGTCCACAGGAGTTGGTCCTTCAAAGTTTGTGAAAGCCTTAAATCTTCCTAAATCTCCAGGCGGAAGAATAGGTGTAGATGAATGGTTGCGTGTTCCTTCTGTGGAAGATGTCTTTGCCCTTGGAGATTGTGCTGGTTTTCTTCAACAAACTGGAAGGCCTGTGCTTCCAGCTCTAGCTCAGGTTGCTGAAAGGGAAGGGAAGTTTCTTGTGGAGCTGTTCAACAAAATTGGGAAGCAGAATGGAGGCAAGGCTTTCTCTGCAAAAGGGACGCCACTGGGAGAGCCTTTTGTGTATAAGCATATTGGGAGCATGGCATCTGTAGGTGGCTATAAAGCACTGGTTGATCTACGGCAGACAAAGGATGCAAAGGGGCTGTCACTTGCTGGTTTTGTTAGCTGGATGATATGGCGCTCTGCATATCTTACACGTGTCCTTAGCTGGAGGAACAGGCTTTACGTGGCAGTAAACTGGGCCACCACATTAGTCTTTGGCAGAGACAATAGTAGGATAGGTTGA 1653 0.4477 MALARIARANFRKSRGAYGSYASEKDLFKVGGYTTIRDTTSHVNFNSDEKFSYVPTNKEHNCVNFAMRGISGTPYHQFPSANAQTVVEESESELENDQRRYAGLEATKPGEKPRVVVLGTGWAACRFLKGLDTKIYDVVCISPRNHMVFTPLLASTCVGTLEFRTVAEPVTRIQDALAKDPNSFFFLASCTGIDTGKHEVYCEAVNNGELPREPYEFKVAYDKLVIAAGAEALTFGIKGVEENAFFLRDVNHAQEIRKRLLLNLMLSENPGIWEQEKKRLLHCVVIGGGPTGVEFSGELSDFITRDVHERYTHVKDYIHVTLIEANEILSSFDVSLRQYATKHLTKSGVRLKRGVVKEVHSKEIILSDGTKVPYGLLVWSTGVGPSKFVKALNLPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLQQTGRPVLPALAQVAEREGKFLVELFNKIGKQNGGKAFSAKGTPLGEPFVYKHIGSMASVGGYKALVDLRQTKDAKGLSLAGFVSWMIWRSAYLTRVLSWRNRLYVAVNWATTLVFGRDNSRIG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03150 550 Gene3D - 104 549 - -
Vian1g03150 550 FunFam Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial 104 548 - -
Vian1g03150 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 282 300 - -
Vian1g03150 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 401 423 - -
Vian1g03150 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Vian1g03150 550 SUPERFAMILY FAD/NAD(P)-binding domain 112 328 IPR036188 -
Vian1g03150 550 Coils Coil 80 107 - -
Vian1g03150 550 Pfam Pyridine nucleotide-disulphide oxidoreductase 114 445 IPR023753 GO:0016491
Vian1g03150 550 SUPERFAMILY FAD/NAD(P)-binding domain 282 450 IPR036188 -
Vian1g03150 550 PANTHER NADH DEHYDROGENASE 100 549 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03150 Vian-Chr1 52520347 52523430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03150 433 549 Chloroplast and Mitochondria Gene Families AT4G21490 31.405 3.51e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03150 K03885 - gmx:100814927 976.081