Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03141 ATGCACGGAAGGTATGGGGAGAGATCGAGCGGCGCGGCGCGAGAGAAGCGAGGTTTGGATTCGGCTTCGGCCGAAGAAGGCCAACCTGATCGGAAACGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTTGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTCGAGCGTGCTTTGGCAAAACTATGCCCCTCCAAGCTTGCTGGCAGGTCTTCCCCAAAGCGAATAGAAGGTCCTGATGGCACAAATTTACAATTGCAGTTCAAGACCAGGCTGTCCCTTCCCCTCTTCACAGGTGGAAAGGTGGAGGGAGAGCAAGGTTCAGCTGTTCATATTGTTTTGATTGATGCAAACACTGGCAATATTGTCACATCAGGGCCAGAGTCATGTGTCAGGCTAGATGTTATTGTACTGGAGGGAGATTTCAATAACGAGGATGATGATAATTGGACTGAAGAAGAATTTGATAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTAACAGGTGATCTGCAAATCACACTGAAGGAAGGTGTAGGAACACTGGGTGAGCTTACATTTACGGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGCCTGAAAGTTGCCTTGGGTTGCTGTGAGGGAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACCGTTAAGGATCATCGCGGAGAATTATACAAGAAGCACTACCCTCCTGCCTTGAATGACGAGGTCTGGAGACTGGAGAAAATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAGTATATACTGTTGAAGACTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATCCTTGGAAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAACATGCCAAGACTTGCGTTCTCAGTGGAAAACATTATGTGTACTATCCTGAAGATGCAAGAAATATGGGTGTTGTTTTCAACAATATTTATGAATTAAGTGGCTTAATTGCCAACGATCAATTTTACTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTTATGTAGACACGTTGGTGAAGAAAGCATATGATAATTGGATGCACGTTATCGAGTATGATGGGAAGTCTCTGGTAAATGACATTGAGGATAAGACTTTGGACACCGCTCATCCTCAGGCACCAATGACTTCCCATGAATATTCAAACTCCCTTCAACAGATGTCCATCCCAGCTTTGCCACTTCCAGGACATGCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGTTACAACTTCTAGATTCTCCTTGCAACCACAGAATCCTAGTCTTAACTCTTCCATTCAGTTTGATGATAACGCATTTTCTCTACAAAACCAGTTGATGAGTGTTCCACACCATGCCCAACTTCCAAGAAATGAGAATGGACTAACTGTTGGTCCTGAACAATCATCTACACATGGCTTTGAGCCTGTCAGCATTTCAAATCCTACTTATAGAGGAGTTGAAGAATACTTCCCTGAGGAAGAAATTCGTATTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTATGTTTAACATGGGGGGCCAACCAAATCCTACCTTTAATGGCCATGATGATGGGTACCCTAGTTCATCTACATACATTTCTGCAAACCCCATGGGCTACAATTTTGATGATGAACCAAATCGTTCCTCAGGCAAAGCTGTTGTAGGCTGGCTCAAGCTGAAGGCAGCATTAAGATGGGGGATTTTTATTCGGAAACAAGCTGCTGAGAGACGGGCACAACTTGTTGAATTGGACGACCCATAG 1896 0.4446 MHGRYGERSSGAAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLCPSKLAGRSSPKRIEGPDGTNLQLQFKTRLSLPLFTGGKVEGEQGSAVHIVLIDANTGNIVTSGPESCVRLDVIVLEGDFNNEDDDNWTEEEFDSHIVKEREGKRPLLTGDLQITLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVALGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKHYVYYPEDARNMGVVFNNIYELSGLIANDQFYSADSLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLVNDIEDKTLDTAHPQAPMTSHEYSNSLQQMSIPALPLPGHAGQPSMDSGVTVGGYHDVTTSRFSLQPQNPSLNSSIQFDDNAFSLQNQLMSVPHHAQLPRNENGLTVGPEQSSTHGFEPVSISNPTYRGVEEYFPEEEIRIRSHEMLENEDMQHLLRMFNMGGQPNPTFNGHDDGYPSSSTYISANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03141 631 PANTHER OS02G0177800 PROTEIN 14 546 IPR012416 GO:0005516
Vian1g03141 631 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Vian1g03141 631 MobiDBLite consensus disorder prediction 1 33 - -
Vian1g03141 631 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Vian1g03141 631 MobiDBLite consensus disorder prediction 1 32 - -
Vian1g03141 631 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03141 Vian-Chr1 52448803 52453848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03141 14 626 Calmodulin-binding Proteins AT5G57580 61.240 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03141 - - gmx:100812605 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03141 1 52448803 52453848 Vian6g01832 6 35759439 35764223 PCT