Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03061 ATGATGGGCGAACAACTTTCTGGTTTGGATATTAAGGAGTTGGGGAATCTGGAAAATCGACTGGAGAGAAGTTTGAAGGGTGTTCGCATGAAAAAGGATCAAATTCTGATTGATGAGGTCAAAGAACTACACCAAAAGGGAAGCCAAGCCAATCAAGAAAATGTCGAACTTCATAGAAAGATAAATCTCATGCGCAAGGACAACGAAGAACTACAAAAGGTTATTGAAGCAAAAGAAAAGGAAGGTACTTTGATAAGTCTTGTGGAGGGAGTCGGAGACGACAGTGGGGTGAATGCCATGGGAGAGTTGGAGGCACTGCTCGAGCAGGGCTTCGGCGATAACAACGACCGTGATAGCATTGTCACCGGCAGCAGAGTGGAGATCATCTTGTCCATACCCTTTGGGTTCGAGACTGGTGCGCACAGTGTTGGCGACGAAGCGAGCGGCCACAATGTTGGCATGGCAGAGCAGAAAGGGCTAGAATCGACGATCTGCTTGGCGATTGATGATAATGACCCACCACTTCCATTCTCAGGGGCCCCTTTTTAA 549 0.4754 MMGEQLSGLDIKELGNLENRLERSLKGVRMKKDQILIDEVKELHQKGSQANQENVELHRKINLMRKDNEELQKVIEAKEKEGTLISLVEGVGDDSGVNAMGELEALLEQGFGDNNDRDSIVTGSRVEIILSIPFGFETGAHSVGDEASGHNVGMAEQKGLESTICLAIDDNDPPLPFSGAPF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03061 182 Coils Coil 54 81 - -
Vian1g03061 182 Pfam K-box region 1 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vian1g03061 182 ProSiteProfiles K-box domain profile. 1 67 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03061 Vian-Chr1 50902658 50913578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03061 1 86 MADS-box Gene Family AT3G57230 53.488 1.34e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03061 K09264 - gmx:100779647 134.42