Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03051 ATGGCAGCATCTTGCTACTGTAAGAAAAGTTATGCAAGTGCTTGTTTTCATGTAACACTCTTGCTTCTTGTAACACCTCATGCAGCTTCATTGGAATTCAACTATCAGCAATTTGGTGACACTGGAAACGACTTCAATACCTCGGGAGATGTTCAAGCTGTGCAAGGAATCCTCCAACTCACCGAGTATAAGCCAGATAGTTATGGTAGAGTCGTATATAACAAATTATTGCATCTTTGGGACAAGAGTTCGGGAAAGGTTGCAGATTTCACTACCCATTTCTTCTTTACCATCAACACCCCAAATAAAACCTATCATGGAGATGGAATCACCTTCTTTCTGGCAGATCCAAAGTTTCCAGACTCCAAAATAGATGGAAGTGGTATTGGTCTGGCCAGCCGTGAGCAACTGGGGTCTATAAATTACGCAAAGGACTTTCCTTTTGTAGCAGTGGAATTTGATACCTTGGCTAATGACTGGGATCCGAAATATGATCATGTGGGTATCGATGTCAATGCTATTAACACTACTCACACTACAGAGTGGTACACTAGCATGGATCAAAGAGGGTATGATGCTGAAATTAGTTTTGAGTCTGTGTCAAACAGATTAAGTGTCACATTCACCGGATATAAGGATAATGCCAAAATTGAACAGACCTTATTCGCAGTGGTCAATTTGAGTGATATCTTACCTGAATGGGTTAAATTTGGTTTCTCTTCGGCAACAGGATATACTTATGAGGAACATACTCTTAGTTCATGGTCCTTCAAATCTAGTTTGGAGATGGAACAAGACAAGGGTGGAAGCAAAAGAGGGCTGGTGATAGGGCTGAGCGTTGGACTTGGTGTTGGTGTTTTAATAGCTATTGTGGGGGTAACTTTTCTTGTGAGATGGATGATGAGGACTAGAGGAATAGAAGATGTCTCCCTTTTTGACCATGCTATGGACAATGATTTCGAAAAAGTCTCTGTACCCAAGAAATTTTCCTATGAAGAACTAGCCAGAGCAACCAATAACTTCGCAACAGAAAACAAAATTGGACAGGGAGGTTTTGGCGCCGTCTACAGGGGATTTATAAGAGAGTTGAACACCTATGTTGCCATTAAGAAGGTATCTCGTGGATCTAGACAAGGGGTGAAAGAGTATATGTCTGAAGTAAAGATCTTTGGTCAACTGAGGCATAAGAATTTGGTTCAACTCTTTGGGTGGTGCCATGAGCATGAGGACCTGCTGCTGATTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTCAAGGGAAAAGGCCTGCTGACATGGAAGGTGAGATACAATATTGCGAGAGGGTTGGCATCAGCATTGTTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTGGATTCTAATTTTAATACAAAGCTTGGTGATTTTGGGTTAGCCAGACTAATGGATCATGGAATAGGATCAAAAACAACCGTTTTAGCAGGAACAATTGGGTATTTGCCTCCTGAAGCTACCACAAGAGGCAAGGCCAGTAGGGAATCTGATGTATTCAGTTTTGGAGTAGTTGCTTTGGAGATAGCCTGTGGTAGAAAAGCAATTGAATCTAATATGAAGGAAGAACAGATGTATTTGGTGGATTGGGTTTTGGAACTCCATAGCATTGGTGAAATCCTTAAAGCTTCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGACGTTAATGATAGTTGGCCTTTGCTGCACTCACACAGATTACCTCATGAGACCTACCATTAGGCAAGTTGTTCAGATGCTTAATTTTGAAGCTCCATTGCCCATTCTCACACAAAGGGGATCAGTCTATAATGCATCTTTCAGTTCTATGGCTTCTGGGACTCCTGCTTTTTCAAATAACCAACCACTGTCTTCAACTTCAAGCAGCAGTGTATTCACGGGGTCCTCACAATCCACAGCAACTCTTGAAATCATTACCCCAACAGCTGCACATTTGCATACCTACTGA 2037 0.4138 MAASCYCKKSYASACFHVTLLLLVTPHAASLEFNYQQFGDTGNDFNTSGDVQAVQGILQLTEYKPDSYGRVVYNKLLHLWDKSSGKVADFTTHFFFTINTPNKTYHGDGITFFLADPKFPDSKIDGSGIGLASREQLGSINYAKDFPFVAVEFDTLANDWDPKYDHVGIDVNAINTTHTTEWYTSMDQRGYDAEISFESVSNRLSVTFTGYKDNAKIEQTLFAVVNLSDILPEWVKFGFSSATGYTYEEHTLSSWSFKSSLEMEQDKGGSKRGLVIGLSVGLGVGVLIAIVGVTFLVRWMMRTRGIEDVSLFDHAMDNDFEKVSVPKKFSYEELARATNNFATENKIGQGGFGAVYRGFIRELNTYVAIKKVSRGSRQGVKEYMSEVKIFGQLRHKNLVQLFGWCHEHEDLLLIYEFMENGSLDSYLFKGKGLLTWKVRYNIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFNTKLGDFGLARLMDHGIGSKTTVLAGTIGYLPPEATTRGKASRESDVFSFGVVALEIACGRKAIESNMKEEQMYLVDWVLELHSIGEILKASDPSLYGHFDEKEMETLMIVGLCCTHTDYLMRPTIRQVVQMLNFEAPLPILTQRGSVYNASFSSMASGTPAFSNNQPLSSTSSSSVFTGSSQSTATLEIITPTAAHLHTY 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03051 678 Pfam Protein kinase domain 342 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03051 678 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Vian1g03051 678 SMART serkin_6 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03051 678 FunFam Lectin-domain containing receptor kinase A4.3 418 629 - -
Vian1g03051 678 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Vian1g03051 678 CDD STKc_IRAK 347 611 - -
Vian1g03051 678 CDD JMTM_APP_like 262 304 - -
Vian1g03051 678 Gene3D Transferase(Phosphotransferase) domain 1 418 626 - -
Vian1g03051 678 PANTHER - 50 615 - -
Vian1g03051 678 SUPERFAMILY Protein kinase-like (PK-like) 325 620 IPR011009 -
Vian1g03051 678 CDD lectin_legume_LecRK_Arcelin_ConA 31 261 IPR001220 GO:0030246
Vian1g03051 678 FunFam L-type lectin-domain containing receptor kinase IX.1 326 417 - -
Vian1g03051 678 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Vian1g03051 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Vian1g03051 678 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03051 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Vian1g03051 678 Pfam Legume lectin domain 30 267 IPR001220 GO:0030246
Vian1g03051 678 Gene3D - 28 277 - -
Vian1g03051 678 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03051 Vian-Chr1 50481992 50484028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03051 21 625 Receptor kinase-like Gene Family AT5G10530 45.907 3.63e-169 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian1g03051 Pkinase 7.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03051 - - gmx:100817213 1039.64