Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03033 ATGCATATGATGGGTTTCAATAAACTCAAACAAAACCCGAATCCAAATCCAAATCCAAAGACCCTTTTTCTTCCTGAATCCAAAGCTTCCACCTTTGCAAGCTTTCTCCAAGTGGGTCATAAAAGAATTAGAAAAAGAAGAAGAAATGTTGCAGCTGTTCTTCACAGTGGCTTTCTCCACAGTTCCTCTGACTCTTTATGTGCCACCGATCAGAAGCTTGAATCTGTTTGTGGAAGCTTGATTTTTCTTGGACCCTTTTTTGTGGTTCTTGATTTTTTTGTGCTGCAATATTTCTCCTTTTTTTTTCTTTTCTTTTTCTTGGTCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAAGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTTCTCTTCCAAACATCACGACCACCACACCGACTCCGACCCCGACCACGACCACGTCCCCGATGCCATCAAGATTCTCCCTTTCGAATTCGTGGCCCTGGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGATCCGTGCTTCCCTCTTCTCTTCTTTTCATTTCTTGCCGACAATTTCCCTCTGTCTTTACCCTAAATCTCTCTCTGATGACTCACAGGCAAAGACGTTGGAGCAAGAGGCTCATCCCGCCTTGGACAAGCTCACATTCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAATCGATTGGTCGCCATCACTGCCCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGATGACGACGATGATATGGCTGAGATGTATCTGACGGATAAGTTAGCCGAACAGCAGATGGAAGAGAGCTCTTCCGCATCCTCCATAAATGACCACGACGAGCAGGATATAGATGACAGGCATCCACCTTTTTTTTTTTTTTCTTTTACCTCTTTTTAA 969 0.4675 MHMMGFNKLKQNPNPNPNPKTLFLPESKASTFASFLQVGHKRIRKRRRNVAAVLHSGFLHSSSDSLCATDQKLESVCGSLIFLGPFFVVLDFFVLQYFSFFFLFFFLVIITAHEVLLLNSRDPSVTPFVQELQARILRHHQAFSSKHHDHHTDSDPDHDHVPDAIKILPFEFVALEACLEAACSVLENEIRASLFSSFHFLPTISLCLYPKSLSDDSQAKTLEQEAHPALDKLTFKISTLNLERVRQIKNRLVAITARVQKVRDELEHLLDDDDDMAEMYLTDKLAEQQMEESSSASSINDHDEQDIDDRHPPFFFFSFTSF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03033 322 Gene3D Magnesium transport protein CorA, transmembrane region 206 308 - -
Vian1g03033 322 Gene3D Magnesium transport protein CorA, transmembrane region 123 199 - -
Vian1g03033 322 Coils Coil 245 272 - -
Vian1g03033 322 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 108 191 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03033 Vian-Chr1 50151193 50152666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03033 108 315 MRS2 Gene Family AT3G19640 51.852 6.81e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03033 - - var:108326592 444.506