Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03014 ATGTTGAGAGTAAAGGGAGGGAAAAGGCCACCTTGGATGGGACTTGGAGCTGCTGTGTGGGTTCAGATTTGTTCAGGAAATGGCTACACTTTCCCTCTCTACTCTCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATTACTCTGCTTGGTGTTGCCAATGATATTGGTGAGAACCTTGGCATTCTTCCTGGTCTCGCCTGCAACAAGTTCCCCCCTTGGCGCATTCTTCTCATTGGTGGTCTCTTATCATTCCTTGGTTTTGGTGTTCTCTGGCTCAGTATTTCCAAAACATTTGATTGCGTTCCTTTCATTGTGACAAGCGTTCGCCACAGCATCACTGTGCCGGCAGGACCAGCGTTCGCTGCCTCACCCACAGCATCACTCAACGTTTTCGATAACAACCAGAACCCATAG 423 0.4846 MLRVKGGKRPPWMGLGAAVWVQICSGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENLGILPGLACNKFPPWRILLIGGLLSFLGFGVLWLSISKTFDCVPFIVTSVRHSITVPAGPAFAASPTASLNVFDNNQNP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03014 140 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 100 - -
Vian1g03014 140 Pfam Nodulin-like 11 111 IPR010658 -
Vian1g03014 140 SUPERFAMILY MFS general substrate transporter 10 125 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03014 Vian-Chr1 49626961 49627506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03014 2 106 Nodulin-like Gene Family AT1G80530 63.810 3.39e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03014 - - gmx:100787328 189.889