LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian1g03013	ATGGTTAAGGCTGACAGCTCCCTGCCTTGCTCACACCATGTGGCTTGGCAATCACCTTCTTTGAATTACTTAAGCATGCTGCCTAAGCCCGGCTCACTCGGTCTCCCAACATATCTGAACTCAAGCACTTCCATCTTACCTCATGGGCTTGCAGCTCCTTCTATTCAAAGTCTGAGGACTCAGCTAACAAATGAAGTGCAAGGATACCTTAAGTATCACAACGTAGACACAAGCCTGAAAGAAACGCATCTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTTGCAAAAGAGGTTACTTATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGGCATGTTCCTCCTCTTGTCCAGAGTCCAATTGTCACTGCTAAGAAGATTGCTCAAAGTTATGACGTAAATGGGGAGGAACAGGCTAGAATTATGGGTCAAAAGCATCTTGCCAGCTATGGTTTACTGGAAGAGTCTGTTAAGGATAATGCAGTTATTGAAGAAAGTGAAAAGCATGAAGATACGGAAGAAATAAATGCATTACTTTATTCCGATGATGACAGCAGTGAATATGATGAGGATAATTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAACTAAAAGGACTTATGTGATACAAGAACAATGTGAGGACTTAAAGGAGGAAGTTGCCAGCTCTTATTGGCCTAAGAAAAAGATGAAGTTAATTACTGGTGGTGACAATAGGTCATCCTCACGTGTGGACAAAACTACTGTGGTACAACCAAATGAAACCTGTGATTATGTTAGTGATGCTGAATCAAAGAACTCTAGTGGTTGGACATATTCTGTTGATAAAACTAAAGTAGATGATTCAGTGGTGTGTGATATCAAATTAAAAAAGGATAAGATCCGGGAATCTTTGAGAGTTCTGGAGAATTTAATTCCTGGTGCAAAAGGAAAGGAGCCAATGTTAGTCATTGATGGAACTATTGAGTACTTGAAAGTTTTGATGTCCCAAACTGGTTCTCTTGGGGTAGAATATCACTAA	1038	0.4017	MVKADSSLPCSHHVAWQSPSLNYLSMLPKPGSLGLPTYLNSSTSILPHGLAAPSIQSLRTQLTNEVQGYLKYHNVDTSLKETHLGGALQNANPSLQKRLLIFDRSDNKTRLFYGHVPPLVQSPIVTAKKIAQSYDVNGEEQARIMGQKHLASYGLLEESVKDNAVIEESEKHEDTEEINALLYSDDDSSEYDEDNCDEVTSTDRSPLATKRTYVIQEQCEDLKEEVASSYWPKKKMKLITGGDNRSSSRVDKTTVVQPNETCDYVSDAESKNSSGWTYSVDKTKVDDSVVCDIKLKKDKIRESLRVLENLIPGAKGKEPMLVIDGTIEYLKVLMSQTGSLGVEYH	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian1g03013	345	PANTHER	TRANSCRIPTION FACTOR BHLH145	10	343	IPR037546	-
	Vian1g03013	345	MobiDBLite	consensus disorder prediction	184	203	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian1g03013	Vian-Chr1	49616852	49617889	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian1g03013	85	345	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	34.058	5.17e-19	84.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian1g03013	-		-	gmx:100817942	514.227