Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02990 ATGGCGGAGCGTGGTTCTTACGGATTGGGACCTCGATTAGATGGAATGCATGCTACTCTATTGAAAAATTATAATGCTGCTGTTGCTGGTAACAAGTTTATGTGGTTCAAAGAAATTCTCCTAGGCCATGTCCTTGCTGGTTTTTCACTTCTGTTTGCTTTCAATTTACTGAGAGCAACATCCTCTTCTGTCTTGGAAGAGCCAGCAGTATCTGTAGTTGAGATGTTCAAGCAAAGCCTTTGCATCCAAGATCTTCAGCAATTACAACTCGAAGCCCAGAATAGGTGGTTGCGCCCTGCGGAAATATGTGAAATTCTTTGCAATTATCGGATGTTTCAAATCACTTCAGAACCACCTACCAGGCCACCAAGTATGGTTTCTGCATATGTTACTGATCAATTTATTACTGCCTCCTATGTCAGTCTCGTGCATATGGGTGGCTCGCTTTTTCTCTTTGATCGGAAGGTTTTAAGGGATATGATGCATATAGTATTTGTGCACTACTTGGATGTTAAGGACTTCACTCTAGACTTGACGGAGGAAAATAGTACTAGGGTTAACAAAACTAATGTTGGTGGAAAAACATATTCTGGTGAGGCCACATCAGATTCCCAGAAGGGAAGTTCTTTGTCATCTGGCTTTCCTAGAAATTATGGTAGTGTGCCTTCTGGAAGTACAGATTCCATGAGCCCAACCAGCACTCTGACGTCTTTATGTGAAGATGCCGATTCAGAGGATATTCATCAAGCCAGTTCAGGATCACAATCCTATCATGAATCAAAATGTTTGGGGAATGATTGCCCTATCGATAAGATTGATGCTCGTTCAAATAATTCGTATCTTATGCATCCATCTTCAGGTGATCGTGGACAGTTTCCAGTTCCTGGATCAGAATATATCCCACTTATTCAGGGTCATAGAGCACACGACATTGCATCATGGGACGATGCCATGGAGCAGTCTTCAGGAAAGCATACTGCTCCTTCTCTTGTATCATCTACATCCATTCCACCAAGTGCATCAGGAAACATCCTTGAAGAAAACAATGCTGTTCCAGGCAACCTTTTAGGGCATAAAAATGTCCTCATCGAAGAGGAAAGGGTCTCTCAGGCTCTCCACTCAAATTGGCAGATTCCTTTTGGGGACGATACAGGAGAATTACCTAAGTGGAGCCTTACCCAAACATTAGGTTTGGAATTTGGATCTGATTATGGCACTAGTTTACTGGGGGATGTAGCAGGCTCAGAAATTCTTGCTGAGATGTTCACTTTTAATGGTGAGTTAAAAGAGAAGTCTGTGAACCAAAACATCTCAAAGCAATATACAAATACACAGTCTCAACCTGCAACAAAATCCAATTCTGATTATGAAGTGGCTGGTGAAGCAAGTATTAATTATACCTTGACCATGAAGCGTGGATTATTGGATGGAGAGGAGAGCTTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAATTTGCTGGTGTGGATGATCTACATACGCAGTCCTCCCCTGGTATTTCATGGAACACAGATGATTGTGGGGATGTGATAGATGATACATCATTAAACCTGTCCCTTTCTCAAGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTATGGTGACAGCATGTAACTGGTCCTGTATGTTTGGGGAAGTAGAAGTTCCTGCTGAGGTTTTAGCAAATGGAATTTTATGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATATAACGTGTTCCAATAGGTTTGCCTGTAGTGAAGTTCGGGAATTCGAGTACAGGGAAGGTTTCGACAGAAATATAGATTTTACAGATCTTTTTACCAGTTCAACTGAAATGGTCCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAATTCAGTGCACACTTCAAATCAAGTGCTTGAGGATGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAAGAATATTCAAGTAGAGAAGAGACAACTGTGGAGATTGATGTAACAAAACACAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGATGTTGTACTCTTGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGGCCTCTTGTATTAAGTGAGGAAGGGCAGGGCGTGTTACATTTAGTTGCTGCTCTTGGTTACGATTGGGCCATAAAACCAATCATAACTGCTGGAGTAAATATCAACTTCCGTGATGTGAGTGGATGGACAGCTCTACATTGGGCTGCATACTGTGGCCGGCGCAAGGGCAGTGGTTTACGTGGATTTCGATCAGATACTGTGAACAAGGTCATCCCTGACCAACCAATAGAGTCTCCGAAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAAGCAAGGTTCCAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGATAATTTGAATTCGATGAATTCTGAAGAGGCAGTTGATGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTGCCTATAGCTTTCGATTGA 2700 0.4167 MAERGSYGLGPRLDGMHATLLKNYNAAVAGNKFMWFKEILLGHVLAGFSLLFAFNLLRATSSSVLEEPAVSVVEMFKQSLCIQDLQQLQLEAQNRWLRPAEICEILCNYRMFQITSEPPTRPPSMVSAYVTDQFITASYVSLVHMGGSLFLFDRKVLRDMMHIVFVHYLDVKDFTLDLTEENSTRVNKTNVGGKTYSGEATSDSQKGSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGSQSYHESKCLGNDCPIDKIDARSNNSYLMHPSSGDRGQFPVPGSEYIPLIQGHRAHDIASWDDAMEQSSGKHTAPSLVSSTSIPPSASGNILEENNAVPGNLLGHKNVLIEEERVSQALHSNWQIPFGDDTGELPKWSLTQTLGLEFGSDYGTSLLGDVAGSEILAEMFTFNGELKEKSVNQNISKQYTNTQSQPATKSNSDYEVAGEASINYTLTMKRGLLDGEESLKKVDSFSRWITKEFAGVDDLHTQSSPGISWNTDDCGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPMVTACNWSCMFGEVEVPAEVLANGILCCQAPPHKIGRVPFYITCSNRFACSEVREFEYREGFDRNIDFTDLFTSSTEMVLHLRLVGLLSLNSVHTSNQVLEDDMEKRNLIFKLISLKEEEEYSSREETTVEIDVTKHKLKEHMFHKQVKEMLYSWLLHKVTETGKGPLVLSEEGQGVLHLVAALGYDWAIKPIITAGVNINFRDVSGWTALHWAAYCGRRKGSGLRGFRSDTVNKVIPDQPIESPKEDDYDFLKEGRKQSEARFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGDNLNSMNSEEAVDGVEDLIDIDMLLDDENFLPIAFD 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02990 899 FunFam Calmodulin-binding transcription activator 2 530 626 - -
Vian1g02990 899 MobiDBLite consensus disorder prediction 187 236 - -
Vian1g02990 899 SUPERFAMILY Ankyrin repeat 722 783 IPR036770 -
Vian1g02990 899 ProSiteProfiles CG-1 DNA-binding domain profile. 85 158 IPR005559 GO:0003677
Vian1g02990 899 Gene3D Immunoglobulins 530 625 IPR013783 -
Vian1g02990 899 Gene3D - 697 795 IPR036770 -
Vian1g02990 899 SUPERFAMILY E set domains 537 623 IPR014756 -
Vian1g02990 899 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 783 861 - -
Vian1g02990 899 Pfam IPT/TIG domain 537 621 IPR002909 -
Vian1g02990 899 SMART CG_1_2 88 172 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02990 Vian-Chr1 49101979 49111740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02990 783 880 CAMTA Transcription Factor Family AT5G64220 61.386 1.08e-29 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02990 K21596 - gmx:100795682 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02990 1 49101979 49111740 Vian6g01968 6 36803078 36813916 PCT