Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02984 ATGGCGAACCCTAAAACCAGGAGTCTTCATTCCCTGGGTGGCGAGGGCGATCCCGAATCATACGAATCACGGTGGGTTTTCCAGGAGGATGAGTATCCCTCCGAGATCGAGGAGTTCGACGCCGCAGATTTACGCCACCAGCCTATGTTTGATTCTGAGGATGAGGACAATGGCGAGCATAGACTCGTTCGCACCGGTCCGCGAATCGATTCATTTGATGTCGAAGCTCTCGAGGTTCCCGGCGCTCAGAGAAACGACTACGAGGATGTTAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGATGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCTATTAATGGAAATGAAGATATTCTTGGAGCTTTATCACTTGTTTTGTACACTTTAATTTTGATTCCTTTACTGAAGTATGTGCTTGTTGTTCTTTGGGCCAATGATGATGGGGAAGGTGGTACGTTTGCATTATACTCGTTGATTTGTCGAAATGCCAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCCCGAATATCGGGCTTTAGACTGAAGGTGCCATCTCCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGATTAGAGAATTCGCTGACTCTTAAGAAGATTCTACTATTATTAGTTCTTGCTGGTATTTCCATGGTGATAGCTAATGGGGTGGTTACGCCGGCAATGTCAGTACTATCATCTGTTAATGGTTTGAAGGTTGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTATCGTTTTGTTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGGCTTGTTGTAGGGCCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATATAACCTTGTTAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTATTCTGTGTGCAACTGGCTCGGAGGCAATGTTTGCAGATCTTTGCTATTTCCCTGTGCGGTCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGATATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGCAATGCTTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACATTCCTCATTGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGACAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGACTGTTTCTTTGGTGTTTGTCTGTACTATATCCAGCCTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGTGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATTCACATCATTGTAGTGCTGATTTTTGCAGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATCATATTGGTCTTTGCAGTATTAATGTTTTTTATAATGTTTGTATGGAATTATGGCAGCAAGCTCAAATATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATGCGAGAATTAAGCTGTAATCTTGGGACAATACGAGCTCCTGGAATCGGTTTGCTCTATAATGAGTTGGTGAAAGGAATTCCAGGCATTTTTGGCCATTTTCTAACCACGCTTCCAGCTATACACTCTATGATTATATTAGTGAGTATTAAATATGTTCCAGTTCCTATGGTTCCCCAAAGTGAAAGGTTTCTTTTTCGGCGAGTTTGTCAGAGAAGCTATCATATATTTCGCTGCATTGCCAGGTATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAACTGTTGATGGAAAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCTCTTGGCGTCCCTCTTCTGGCTGATTTTATTGATACAAACATACCCATACCCAATTTGGAAGCAAGCACATCTGAGGATGCAAACCCTGAATCTCCTAAGCCCCCAGTGCTTGATGCTGAGCAGAGTCTTGAGAGAGAATTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTTGGTCATGGGGATATAAGGGCTAGGAAAGACTCATGGTTTATCAAGAAGCTAATTATAAATTATTTTTATTCTTTTCTGAGAAAGAACTGCCGGAGGGGGATCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTAA 2541 0.4187 MANPKTRSLHSLGGEGDPESYESRWVFQEDEYPSEIEEFDAADLRHQPMFDSEDEDNGEHRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSPELERSLKIKERLENSLTLKKILLLLVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLIVLFSVQKYGTSKVGLVVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCILCATGSEAMFADLCYFPVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLTVSLVFVCTISSLDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLIFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVLMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELSCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIILVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGSRVLIAPNGSVYSLGVPLLADFIDTNIPIPNLEASTSEDANPESPKPPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02984 846 NCBIfam potassium uptake protein 98 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02984 846 MobiDBLite consensus disorder prediction 698 717 - -
Vian1g02984 846 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02984 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02984 846 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02984 Vian-Chr1 48990731 49010394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02984 11 846 Inorganic Solute Cotransporters AT5G09400 78.436 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02984 - - gmx:100803841 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02984 1 48990731 49010394 Vian1g02984 1 48990731 49010394 ECH
Vian1g02984 1 48990731 49010394 Vian6g01970 6 36826160 36831315 PCT