Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02958 ATGAATATGGATAGTGAAATTCACGGAGTTCATCCTGATATTCTGATGATTACCAATTCTCAAGTAGAGATGGGTAATGCATTGTGTGAGAATGACAGGAGGTCTGAGCCCATAGATGTTAAGATGAAGGAGTTATCTGAGAACCAGACTATTGCTGTCCATGGTATAGCTGGTGCTGGGTCAGTGGTTTTTGCCACTGCCTTCACTTATCCACTCGACACTATGAAAGTTCTTATTCAGGTTGGTTCCACTACTGGTAAACAATTGGACGCTGCTCAGGCTTTGTCGAGAGTAGTCTTTCTGTCGGGTAATGCAGGTTTGTACAGTGGTTTTGGCTGGTTGGCAGTTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTATGAAATTCTGACTGCCTTTTCTAAAGATGGTCGGGAAGATAATTATTTGTTTCCTTCCGAGGCACTTTTGGCTGGCATGGCATCTGGTGCCATTGAGACAGTCGTAAGCTCTCCATTTGAACTCATCAAGCTTCGCAAGCAGGTTACCTCTGCTTCATATGCTCCGAGCCCCAACTTTGCTCTGGAAAATGGGACTCGTAAACCTTTAATTGCAAGGTTACTTAATGGCTGTTATCCAGACAAAAGGTCCTTGGACCTGTATACTCGTCTTATCTCCACCTTAACAACAAAAAATACGAACATGACTAGTGCTTTACTAGAGTATCCATGGACAATGACAGGATCTGGGAAGCCACCAGCTGTTTCCAGTGTCAGGAGACCATCTGACATTATAACTTTAGAAGGCTGGAGCACTTTATGGAGAGGTCTTCGTTCTGGAATTGCACGAGATTCTGTGTTTGGGGGCATATTTTTTTCAACCTGGCAATTTCTTCACCAAGCCATGCTAGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTAAATGAAGACGTTGGTCCATTGTCTCCTTTCACTGTTAGTCTTACTGCTGGATTCTCAGCTTCTGTTGCTGCTGCTGCTTCTCATGGTTTTGATACTTCAAGAAGTAGATCACAATGTAATGTGCTTCCAAAGCACATGTCAATGGAGAGAAAGATTTTGAAATGGAAGCGACCAGGAAACAAGTTTGAAAGAATGACTGGAATCCATCCTTTAGACAGGAATGTCTTGTTCCACGGTATTGGTTGGCGGATGGCTCGCACTGGGTTGGCGTCATCAATGATTGTAGGAAGTTATTTATTTGTTGCTGATCAGCTTACTTCTATTTTGACTTAA 1266 0.4344 MNMDSEIHGVHPDILMITNSQVEMGNALCENDRRSEPIDVKMKELSENQTIAVHGIAGAGSVVFATAFTYPLDTMKVLIQVGSTTGKQLDAAQALSRVVFLSGNAGLYSGFGWLAVGRIFGLGARFGVYEILTAFSKDGREDNYLFPSEALLAGMASGAIETVVSSPFELIKLRKQVTSASYAPSPNFALENGTRKPLIARLLNGCYPDKRSLDLYTRLISTLTTKNTNMTSALLEYPWTMTGSGKPPAVSSVRRPSDIITLEGWSTLWRGLRSGIARDSVFGGIFFSTWQFLHQAMLDWKAVGMNPPPRLNEDVGPLSPFTVSLTAGFSASVAAAASHGFDTSRSRSQCNVLPKHMSMERKILKWKRPGNKFERMTGIHPLDRNVLFHGIGWRMARTGLASSMIVGSYLFVADQLTSILT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02958 421 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 135 IPR018108 -
Vian1g02958 421 SUPERFAMILY Mitochondrial carrier 50 407 IPR023395 -
Vian1g02958 421 Gene3D Mitochondrial carrier domain 209 418 IPR023395 -
Vian1g02958 421 Gene3D Mitochondrial carrier domain 26 208 IPR023395 -
Vian1g02958 421 Pfam Mitochondrial carrier protein 149 297 IPR018108 -
Vian1g02958 421 Pfam Mitochondrial carrier protein 50 134 IPR018108 -
Vian1g02958 421 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 55 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02958 Vian-Chr1 48594920 48601291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02958 70 299 Antiporters AT1G79900 24.528 2.28e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02958 - - gmx:100813634 625.55