Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02950 ATGGCAAACCTTGGAGCTCGAATTAATGATGTTTCATCAAACCAAGTTGAGATCCCTGTCCATTGTGATGGTGTGGAGCCAAAACCAAGTGAAGAGAGCAACATTGACTACTCTCAAAGGGCTCAGTGGCTTCGAGCAGCAGTGTTGGGAGCCAATGATGGGTTAGTCTCTGTTGCCTCACTCATGATGGGTGTTGGAGCTGTTAAGCAAGACATCAGTGCCATGCTTGTTGCTGGTTTTGCTGGATTAGTTGCTGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGATGACTCAGCTTAAAAGAGAGAGGGAAGCTAATAATAATGGAGGAGTGAATGGAGAACCTCAAAGGGAGAAGTTGCCAAACCCATTTCAGGCTGCACTGGCATCAGCACTGGCATTTTCTATTGGTGCTTTGGTGCCAATGTTAGCAGCTGTGTTTATAAGGAGCCACAAGATTAGGATGGGAGTTGTTGTTGCAGCGGTTAGCCTGGCGCTGTTGGTGTTTGGAGGGTTAGGAGCAGTTCTTGGAAAAACTCCAGTGATGAGGTCTTGTCTCAGGGTTTTGATTGGAGGTTGGATGGCTATGGCTGTAACGTTTGGCCTCACTAAATTGATTGGCTCTGCTCAACTTTGA 666 0.467 MANLGARINDVSSNQVEIPVHCDGVEPKPSEESNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKQDISAMLVAGFAGLVAGACSMAIGEFVSVYTQYDIEMTQLKREREANNNGGVNGEPQREKLPNPFQAALASALAFSIGALVPMLAAVFIRSHKIRMGVVVAAVSLALLVFGGLGAVLGKTPVMRSCLRVLIGGWMAMAVTFGLTKLIGSAQL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02950 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 216 IPR008217 GO:0005384|GO:0030026
Vian1g02950 221 Pfam VIT family 127 213 IPR008217 GO:0005384|GO:0030026
Vian1g02950 221 Pfam VIT family 44 117 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02950 Vian-Chr1 48365751 48366416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02950 25 221 Nodulin-like Gene Family AT3G43660 66.497 1.58e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02950 K22736 - gmx:100802489 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02950 1 48365751 48366416 Vian1g02950 1 48365751 48366416 ECH