Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02949 ATGGCCAACCTTGGAGCTAGAACCAATGGAATTTCATCAAACCAAGTTGAGATCCCTATCCATGCAAATGGTGTGGAGTCAAAACCAAGCGAAGAGAGCAACATTGACTACTCTCAAAGGGCTCAGTGGCTTCGAGCAGCAGTGTTGGGAGCCAATGATGGGTTAGTCTCTGTTGCTTCACTTATGATTGGTATTGGAGCCGTTAAGAAAGAGATCAGTGCCATGCTTGTTGCTGGTTTTGCTGGATTAGTTGCAGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTGTCTGTGTACACTCAGTATGACATAGAGGTGACTCAGCTTAAAAGGGAGAGAGAGGCTAATAACAATGGAGGAATGGATGGAGAATCTGAAAGGGAGAAGCTACCAAACCCTTTTCAGGCTGCAATGGCATCAGCACTGGCATTTTCTGTTGGTGCATTGGTGCCAATGCTAGCAGCTGTGTTTATAAGGAGCCACAAGATTAGGATGGGAGTTATTGGTGGTGCAGTTAGCTTGGCATTGTTGGTGTTTGGAGGGATAGGAGCAGTGCTGGGAAAAACTCCAGTGAAGAAATCTTGTTTGAGGGTGCTGATTGGAGGTTGGATGGCCATGGCCATAACATTTGGCCTCACTAAATTGGCTGGCTTTGCTGAACTTTGA 666 0.464 MANLGARTNGISSNQVEIPIHANGVESKPSEESNIDYSQRAQWLRAAVLGANDGLVSVASLMIGIGAVKKEISAMLVAGFAGLVAGACSMAIGEFVSVYTQYDIEVTQLKREREANNNGGMDGESEREKLPNPFQAAMASALAFSVGALVPMLAAVFIRSHKIRMGVIGGAVSLALLVFGGIGAVLGKTPVKKSCLRVLIGGWMAMAITFGLTKLAGFAEL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02949 221 Pfam VIT family 44 118 IPR008217 GO:0005384|GO:0030026
Vian1g02949 221 Pfam VIT family 125 213 IPR008217 GO:0005384|GO:0030026
Vian1g02949 221 CDD Nodulin-21 42 190 - -
Vian1g02949 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02949 Vian-Chr1 48335520 48336185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02949 25 217 Nodulin-like Gene Family AT3G43660 66.321 2.90e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02949 K22736 - gmx:100802489 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02949 1 48335520 48336185 Vian1g02949 1 48335520 48336185 ECH