Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02948 ATGGCTACAGCTACATCCAATGGTTTGGTGTCACAAAACCATGTAGGACCAGTGCATCCAAGTCCAGCAAACAAAACTGATGAGAAGCAAACACAAAAAGTTACCGAAGATGATGCAAACATAAACTACATTGAAAGAGCGCAGTGGCTTCGTCCAGCAGTTTTAGGAGCCAATGATGGGTTGGTTTCGGTTGCTTCATTGATGATGGGTGTAGGAGCCGTTAAAAAAGACCCAAAGGCTATGCTACTTGCTGGTTTTGCAGGGTTGGTTTCAGGGGCTTGTGGTATGGCGATAGGAGAGTACGTTGCAGTGTACACTCAGTATGATGTTGAGATTGGTCAAATGAAGAGAGATATGAAGATGAGTGTAGGAGGGGAAAAGGACTTGGAGATGGAAGTGGAGAAAAGAACATTACCTAATCCACTGCAAGCTACTTTGGCATCTGCAGTATCCTTTTCTATAGGTGCATTGATTCCTCTACTTTCTGCCGCTTTCATAGAACGTTACATGACAAGGGTTATTGTGGTTGTGGCAACGGTTAGCTTGGCTTTGCTGATGTTTGGAAGGGTGGTGGCTCAACTGGGAAAAACTCCTAAGTTAAAATCTCATGTAAGGTTCCTTCTTGGAGGATGGATAGCCATGGCCATCACTTTTGGGTTAACCAAATTACTGGATACTAGTGCTTTAATGTAG 693 0.4372 MATATSNGLVSQNHVGPVHPSPANKTDEKQTQKVTEDDANINYIERAQWLRPAVLGANDGLVSVASLMMGVGAVKKDPKAMLLAGFAGLVSGACGMAIGEYVAVYTQYDVEIGQMKRDMKMSVGGEKDLEMEVEKRTLPNPLQATLASAVSFSIGALIPLLSAAFIERYMTRVIVVVATVSLALLMFGRVVAQLGKTPKLKSHVRFLLGGWIAMAITFGLTKLLDTSALM 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02948 230 CDD Nodulin-21 48 199 - -
Vian1g02948 230 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 225 IPR008217 GO:0005384|GO:0030026
Vian1g02948 230 MobiDBLite consensus disorder prediction 1 36 - -
Vian1g02948 230 MobiDBLite consensus disorder prediction 1 28 - -
Vian1g02948 230 Pfam VIT family 50 118 IPR008217 GO:0005384|GO:0030026
Vian1g02948 230 Pfam VIT family 130 221 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02948 Vian-Chr1 48308243 48308935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02948 36 229 Nodulin-like Gene Family AT3G43660 58.247 3.20e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02948 K22736 - gmx:100803012 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02948 1 48308243 48308935 Vian1g02948 1 48308243 48308935 ECH