Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02944 ATGAAATATCATAGAAAAGTAGTGCAAGAGCTGAAGCCGGCGTCGCTAATGGTGCTGTCGCAGGTTGCAACTGCGGCTGCGAACGTGCTTTATAAATTGACCATAAATGATGGAATGAGCATTATGGTCCTCACTTCCTACCGTCACATTTTCGGAGCTGCATTCTCTCTTTCTCTTGCTCTTGTTATAGAAAGGGGCAGTTTAGCGCAAAATCTTTATTTCATCGGTTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCTGTGGTTACTTTTATCTTCTCCGTTTTGTTCGGCTTGGAAAAGTTAAGCTTGCGAACCGCCTCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGGTCAATGCTGTTGACATTTTACAGAGGGGAAGAAATTAAGATGTGGAGATTCCACACTAGTCTCTTACATAAAAATCAAAAGGGGCACCTAGGATCATCGCACGTTGACTCTGGAAGAAGATGGGTAGGTGTTTTATGTGGTCTTGGAAGTGTTCTAAGTTTTTCATCATGGCTCATCATTCAGACAAGGATGAGCAAAGAATATCCAAGCCATCTCTCAAGTACTGCATTGATGACCTTCATGGGGGCAATTCAAGCCACAGTCTTTGCTCTATGTGTTGAGAAGGATTGGAGCCAATGGAGATTGGGTTGGAGTATCAGGCTTCTAACTGCAGCTTTCTCTGGAATTGTGCTATCTGGAGTTGTTGTTATTGTCACTTCTTGGTGTGTAGGAGTTAAAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCACTTGTCATTGTGGCTATTTTTGCTCCTTTGCTGTTGGAGGAAAACCTATATCTAGGAAGTGTCATTGGAGCCGTGCTTATTGTGTCTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAAAAACATCATCGGAAAAAACGAAACATGTTGAAGCGAGTTCAGGAGTTAAAATTACCAACAGTGATATTAGTTACATGGTTGACAATGAGAGTATCCGAGAACGGACATGA 1056 0.4252 MKYHRKVVQELKPASLMVLSQVATAAANVLYKLTINDGMSIMVLTSYRHIFGAAFSLSLALVIERGSLAQNLYFIGLAWVSATFATSLYNLVPVVTFIFSVLFGLEKLSLRTASGRVKVLGPIIGIVGSMLLTFYRGEEIKMWRFHTSLLHKNQKGHLGSSHVDSGRRWVGVLCGLGSVLSFSSWLIIQTRMSKEYPSHLSSTALMTFMGAIQATVFALCVEKDWSQWRLGWSIRLLTAAFSGIVLSGVVVIVTSWCVGVKGPLYASVFNPLSLVIVAIFAPLLLEENLYLGSVIGAVLIVSGLYMVLWGKSKEIKTSSEKTKHVEASSGVKITNSDISYMVDNESIRERT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02944 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 126 - -
Vian1g02944 351 PANTHER WAT1-RELATED PROTEIN 13 319 IPR030184 GO:0016020|GO:0022857
Vian1g02944 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 313 - -
Vian1g02944 351 Pfam EamA-like transporter family 170 308 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02944 Vian-Chr1 48235268 48237142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02944 9 339 Nodulin-like Gene Family AT1G68170 37.006 4.92e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02944 - - var:108326689 643.654