Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02942 ATGAAGAACCTAGTGCAAGACTTAAAGCCTGTGGTGCTGATGGTATTGGTTCAAATAACATATTCTTCTGTTAATGTGCTGTATAAGCTGGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGTCTTATTTTTGCAGTAGTTTTCACTTTTTCTCTTGCTCTTATTTTCGAAAGTGCAAGTTTATTGCATAATCTATTCCTGGAGGCCTTGGATTTGGTGTCTGCAACATTCGCTACAGCAATTTATAATCTTGTTCCTGCAGTCACTTTTATTTTGGCAATCTCGTGCGGCATGGAAAAGTTGAATATGAGAAGCACAGCAGGGAAGGCCAAGGTGGTGGGAACGATTATAGGAATTGGAGGGTCAATGTTTCTGACATTTTTCAAAGGGCAAGAAATTGATGTTAAGAGTTTCCACACTGATCTTCTGCATAAAAATAACCATGTTTTAACTCTGCATAATACTGATTCTAGCCATAGATTTCTGGGTGCTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATAAACAAAGAATACCCCAGTCATCACTCAAGTACTGCGTTGATGTCCTTAATGGCTGCAATACAAGCCACAGCCTTTGCCCTTTATGTTGAAAAGGACTGGAACCAGTGGAAGTTGTCTTCTAGAATTAGGATTCTAACTGTGGTTTATACGGGAATCGTGGCCTCTGGATTAGTGGTAATCGCCATTGCATGGTGTGTAAAAATGAGAGGTCCGATGTTTGTATCTGTTTTCAACCCTCTGATGCTCGTGCTTGTGGCTGTGGCTGATTGCTTGATGTTAGGAGGTGGCGGTGGGCATGTTAGCCGTGGTCGTTGTGACGGTGGCTCCGACGGTGGAGCGCTGGATTCATCTGGGTCTTCGGGATAA 930 0.4269 MKNLVQDLKPVVLMVLVQITYSSVNVLYKLAINDGMSIRVVTAYRLIFAVVFTFSLALIFESASLLHNLFLEALDLVSATFATAIYNLVPAVTFILAISCGMEKLNMRSTAGKAKVVGTIIGIGGSMFLTFFKGQEIDVKSFHTDLLHKNNHVLTLHNTDSSHRFLGALCGFGSCFSFALWLIIQSKINKEYPSHHSSTALMSLMAAIQATAFALYVEKDWNQWKLSSRIRILTVVYTGIVASGLVVIAIAWCVKMRGPMFVSVFNPLMLVLVAVADCLMLGGGGGHVSRGRCDGGSDGGALDSSGSSG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02942 309 PANTHER WAT1-RELATED PROTEIN 9 282 IPR030184 GO:0016020|GO:0022857
Vian1g02942 309 Pfam EamA-like transporter family 166 282 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02942 Vian-Chr1 48187325 48192084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02942 8 275 Nodulin-like Gene Family AT1G25270 37.931 1.38e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02942 - - gmx:100813812 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02942 1 48187325 48192084 Vian1g02942 1 48187325 48192084 ECH
Vian6g02019 6 37292449 37294446 Vian1g02942 1 48187325 48192084 PCT