Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02941 ATGAACCAAATAAAACACAGTATCATTGCATCAAATCCAGTTTTGCATTTTGATGCAAAACGGATAGCGCAGAACGGATACGATGGATTTGATGCAATGGAATGGATGGAATCGAAACATCTGCAAGATGTTACTGGGCAAGTTGCATTCCAAGGTTTTCTCTGTGGGTTATTTGGGGGATCCTTACTACAAGGTCTCTACGTTAAATCGTTGGCCTTGACGTCTGCAGTATATGTTTCAGCCATGTTGAATCTCGTCCCTGGTGTCACCTACCTTATGTCTATTTCTCTCGGACTTGAGAAGGCTAATCTTGGAACAGCAGGTGGCATGGCCAAGTTGGTGGGAACTTTAACAGGAATAGGTGGTGCCATGATCATCACTTTCTACAAAGGAAGAAAGCTATGCCTTTGGTCATCACATATTGGCTTCTTGCACCATGCACCATCACCAGATGGTGCCCCCACAGGTTCTCTCTTGTGGGGCTGCATACTAGCCTTTGGAGCCGCTTTGAGTTACTCAGTGTGGTTGATAATCCAGACAAAGATGAGCGAGAAATTTCCGTGGCACTACTCGATTGCGGCTATGACATCTTCAACAGCCTCAATCCAATCCGTTTCATTTGTTCTCTTTACGGAGAGAGATTGGAGCAAGTGGAAAATTGGTTGGAACTTTAGGCTCGTAACAGCAGTTTCTGCGGGAATTTTGGCCTCTGGAGTGTGTTACACCCTTTTAGCGTGGTGTGTGCGAAGGAAGGGACCACTATTTGCGTCTGCTTTTAGTCCTCTAATGGTGGTGATTGTGACCCTTCTCGAGCCTTTGATACTAGATGAATGTCCCAACATTGGAAGTGTTACAGGATCAGTGGTGGTTGTGGGGGGATTGTACCTGCTGCTGTGGGGAAAAAGCAAGGAAACACAGATGAAGCAGAACGATGTGTTCTCAAAAGACTCTGTTCAATGTGAAACAATCCACTCTACCAATCCATCTTTAGCAAGCTGGCAAAAGGATAAAGACAACAAGATTGTAGCAAGTGTTACTTCCTGTTCACCATCAACTATATCAACCAATCCTGAGTGA 1077 0.4485 MNQIKHSIIASNPVLHFDAKRIAQNGYDGFDAMEWMESKHLQDVTGQVAFQGFLCGLFGGSLLQGLYVKSLALTSAVYVSAMLNLVPGVTYLMSISLGLEKANLGTAGGMAKLVGTLTGIGGAMIITFYKGRKLCLWSSHIGFLHHAPSPDGAPTGSLLWGCILAFGAALSYSVWLIIQTKMSEKFPWHYSIAAMTSSTASIQSVSFVLFTERDWSKWKIGWNFRLVTAVSAGILASGVCYTLLAWCVRRKGPLFASAFSPLMVVIVTLLEPLILDECPNIGSVTGSVVVVGGLYLLLWGKSKETQMKQNDVFSKDSVQCETIHSTNPSLASWQKDKDNKIVASVTSCSPSTISTNPE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02941 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 303 - -
Vian1g02941 358 PANTHER WAT1-RELATED PROTEIN 48 309 IPR030184 GO:0016020|GO:0022857
Vian1g02941 358 Pfam EamA-like transporter family 159 298 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02941 Vian-Chr1 48120093 48126477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02941 66 306 Nodulin-like Gene Family AT1G68170 39.095 2.54e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02941 - - pvu:PHAVU_002G204400g 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02941 1 48120093 48126477 Vian1g02941 1 48120093 48126477 ECH