Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02933 ATGGCGTCGTCGAAGGTTGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCTTCTATATCTCCCCTTTCCTCTCTTCTCCTCTCCGATCTGCACCACTCAACCTCCATGGACGACCTTCTCAAGTCCATCACCCCTTCAGCCGCCAAGACCGTCGACGATGTCTGGAAGGAGATCGTTGCCGGCGCTCACCCCCACCATCCCCCCGCCGCCGTCTCCGGAGACAGAAATGCCGCCACCGTCAACGCCACCGCCCCAGAGGGCTACGAGGCTATTACCCTGGAGGATTTCCTCACCAAGGCCGGCGCCGTCAGAGAGGAGGACGTGAGAGGGGTTCTGCCCCCTTCTTCCTCTCTCCCCTTTCCTCTCCCTCTGCCCGCCGAAGGCTCATCTTCCTCCGTTGAACCCTTTGGAAACGGCGTTGCGCCCACCAATTCGGTTCCCAAAGGGAAGAGAAGGGTCGTGGAGGAACCGGTGGACAAGGCCACGCTTCAGAAGCAGAGGAGGATGATCAAGAATCGAGAGTCCGCTGCTAGGTCCCGGGAACGCAAGCAGGGATTCTTGTGGGAAGTCCAAAATCTTTTGTTCAATGTGGTTTCTAGTTTCGAGGCTTATACATCGGAGCTTGAGTATCTGGTTCACCAGCTGGAGCAAGAGAACGCCCGGTTAGTTAACGAAGAGTTGTTGTATGGTACATCCTTTGGCATAGGCGATGCTGAGATGAGAAGGCAGAGGAAGAAACAGCTCTTGGAGTACATAATTCCAGTTGAAGTGATGCCTAAACCCAGAAAGAAACTTCGGAGAGTAAATTCAGCTCAATCATTGTGA 828 0.5483 MASSKVVVSTNPDLPRDSSISPLSSLLLSDLHHSTSMDDLLKSITPSAAKTVDDVWKEIVAGAHPHHPPAAVSGDRNAATVNATAPEGYEAITLEDFLTKAGAVREEDVRGVLPPSSSLPFPLPLPAEGSSSSVEPFGNGVAPTNSVPKGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQGFLWEVQNLLFNVVSSFEAYTSELEYLVHQLEQENARLVNEELLYGTSFGIGDAEMRRQRKKQLLEYIIPVEVMPKPRKKLRRVNSAQSL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02933 275 MobiDBLite consensus disorder prediction 130 155 - -
Vian1g02933 275 MobiDBLite consensus disorder prediction 1 20 - -
Vian1g02933 275 Coils Coil 206 226 - -
Vian1g02933 275 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 270 IPR043452 GO:0003700|GO:0045893
Vian1g02933 275 SUPERFAMILY Leucine zipper domain 165 217 IPR046347 GO:0003700|GO:0006355
Vian1g02933 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700|GO:0006355
Vian1g02933 275 Gene3D - 164 229 - -
Vian1g02933 275 CDD bZIP_plant_BZIP46 165 223 - -
Vian1g02933 275 SMART brlzneu 161 222 IPR004827 GO:0003700|GO:0006355
Vian1g02933 275 Pfam bZIP transcription factor 162 185 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02933 Vian-Chr1 47988174 47990538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02933 49 262 bZIP Transcription Factor Family AT1G03970 39.013 1.24e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian1g02933 bZIP_1 5.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02933 K14432 - gmx:100101890 242.662