Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02926 ATGGGTAGAAGCCAAAACCCCACAAACATGGAAATTGATCTATCTTTGAAGATAGATGCTGATGATGAACAAAAACCACAACTTGATGAGCAAGTCAAAGAGTATAACCACGAACAAAAAATGCCACAGATTCTTGATCATAACAAGGAAGAAGTCCCTGAAGCTGCAGCTGGTGAAATAGAAGATGATGCATCAGTGGTACAAACATCTTTTCAAGATAACACAAAAACAAAAGAGTTAAGTGTCCTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTTCTGAGGAAAGTTGTAGAACAAACAATGAAAGACTATTATGATCTGCAGATGAAATTCTCAGCTATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCCCTTCAAGACATTGCCACCACCAGCGGTGAAGGACCATCGAGAATTCTTGAGATCGTGAATAAGAAAATTCAAAGGGCTCCATCTCCACCAAACACTGATGATGACAGTTTAAGCGAGAGTGAATTGGGTTTATCACTGAGGTTGCAGCCAAGCACAAGTCAAAAAGAAAGTGATGTGGGAAACAAGGAAGACAGAAAAGATCAGCAATTGGCAAGTTTTGTGTCAGTGCAGAACAAACTACAGCGGACACATGAGTTGCCCGGTATGACTACCCATGCTATCTCCCCTCCAAACAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTGAAGCTGCCACAGTACAAAGATGCATAGATGACATGTCGATTCTTATTACAACCTACGAAGGGACACATAATCATCCACTTCCTGTGGGTGCAACTGCCATGGCTTCTACAGCTTCTGCAGCAGCTTCCTTCATGTTGCTAGATTCAAGCAACCCTATTTCAGATGGCACTTCTAGTTTCACTCAAGCACCCCTTCCTTACAACGCCTTCCACCCATTAAACTCAGCTTCGAATTTCAGGAGCATAAACCCCAATGATCCATCAAAAGGGGTTGTTCTTGATCTTACAAGCAATCTCAGTGAACCACTACGTTTTTCAACCGGTAGCTCCTCAAATACCACAACTGACACCCGATTTTCTTGGATGCCAAACAAATACCATGGTGGTGGTGCAATCTCAATGAACAACAATTTTCACAAGCCTAGACCAGTGGACATTCATGATAGAATGTGGAAAGGAGAAGAAAGCAAGCAACTTGATGAGAATGTTTCTGCAATTGCCTCAGATCCCAAGTTTAGGGTTGCTGTTGCTGCAGCCATAACATCTCTCATGAATAAAGAGAGCCACAATGCTAATCATCCTATAGGGACTTCATTTGGTCCTAGGAGTGGCCAAAATGGTAGCTAG 1350 0.4207 MGRSQNPTNMEIDLSLKIDADDEQKPQLDEQVKEYNHEQKMPQILDHNKEEVPEAAAGEIEDDASVVQTSFQDNTKTKELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQMKFSAIQENNKRKDHEISLSLQDIATTSGEGPSRILEIVNKKIQRAPSPPNTDDDSLSESELGLSLRLQPSTSQKESDVGNKEDRKDQQLASFVSVQNKLQRTHELPGMTTHAISPPNRKARVSVRARCEAATVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDGTSSFTQAPLPYNAFHPLNSASNFRSINPNDPSKGVVLDLTSNLSEPLRFSTGSSSNTTTDTRFSWMPNKYHGGGAISMNNNFHKPRPVDIHDRMWKGEESKQLDENVSAIASDPKFRVAVAAAITSLMNKESHNANHPIGTSFGPRSGQNGS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02926 449 ProSiteProfiles WRKY domain profile. 246 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g02926 449 MobiDBLite consensus disorder prediction 155 199 - -
Vian1g02926 449 MobiDBLite consensus disorder prediction 212 231 - -
Vian1g02926 449 Coils Coil 80 107 - -
Vian1g02926 449 MobiDBLite consensus disorder prediction 1 27 - -
Vian1g02926 449 MobiDBLite consensus disorder prediction 429 449 - -
Vian1g02926 449 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 61 246 IPR044810 GO:0003700
Vian1g02926 449 MobiDBLite consensus disorder prediction 157 188 - -
Vian1g02926 449 Gene3D WRKY domain 203 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02926 Vian-Chr1 47838792 47840945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02926 83 331 WRKY Transcription Factor Family AT1G68150 40.000 3.40e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02926 - - var:108321024 762.681