Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02925 ATGGAGTGGAGGCGTCGGACCAAGAAGCAGGCTCAGGCTCAGCCGCGGTTGCAGCGCCTCAACGCCAAAAAGGGCTTTAATTACCAACCACCACCGTCTCCGCCGTCTCCTTCTTCAACCTCTTCTTCCTCCCATTTCGATCGCCAAACCAGCTTCCGCCTATTCGGCATCGAGGGCGAGTTCGACCGCATCTTCCAGACCTTGGGTCTGTCCGGCCCGGAAGACTTCGCCATCCCAACAGCAGACTGGGAAGCCCGCAAGGTCCGCGTTGCTTCTTCCAAGGCCCCCGGGCCCACCCCTACCCCTAACGCGCTTATCCACTCTTCTACCGAGATCCACCCTCTTTCCGTCACCACTACTTCTGCGACTACCCTCCAAGACGATGTCGTTTCAGTTCACGTTTCCGTTATGGGTTCCTCCCCTTGGTCCTCCGGGGAGCATGACGCGGGTAGGGGTAGTGTCGGCAGGTTGAGGAATGGAGAAAGGAGCGTGCTTTTCACCGATTCAGGTTCCTTCACCACTTCCCACGATGATGACAGTGACATTGGCGGCGAGAGGGTTAGTTCGGTTTCTAATTCCGCCGCCCCGGATGAGCTGGTTGTGCCTTTTGTTTCCTCCTTTTCCTTTGAGTGGTTCAGACAGACTTTCTCATCCTGGCAAAAAGGTGACGTCTTGGGAAATGGGTCTTTCGGGACCGTCTATGAAGGCTTCACTGATGAGGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTAATCAGGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTCGGACAAGGTATGCTGTGTTGTCTAG 882 0.5329 MEWRRRTKKQAQAQPRLQRLNAKKGFNYQPPPSPPSPSSTSSSSHFDRQTSFRLFGIEGEFDRIFQTLGLSGPEDFAIPTADWEARKVRVASSKAPGPTPTPNALIHSSTEIHPLSVTTTSATTLQDDVVSVHVSVMGSSPWSSGEHDAGRGSVGRLRNGERSVLFTDSGSFTTSHDDDSDIGGERVSSVSNSAAPDELVVPFVSSFSFEWFRQTFSSWQKGDVLGNGSFGTVYEGFTDEGFFFAVKEVSLLDEGNQGKQSIFQLQQEISLLSKFEHKNIVRYYGSDKVCCVV 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02925 293 MobiDBLite consensus disorder prediction 1 47 - -
Vian1g02925 293 Gene3D Phosphorylase Kinase; domain 1 204 292 - -
Vian1g02925 293 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 52 288 - -
Vian1g02925 293 SUPERFAMILY Protein kinase-like (PK-like) 199 286 IPR011009 -
Vian1g02925 293 MobiDBLite consensus disorder prediction 168 189 - -
Vian1g02925 293 ProSitePatterns Protein kinases ATP-binding region signature. 225 247 IPR017441 GO:0005524
Vian1g02925 293 ProSiteProfiles Protein kinase domain profile. 219 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g02925 293 Pfam Protein kinase domain 220 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02925 Vian-Chr1 47822152 47824340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02925 5 86 MAP Kinase Kinase Kinase AT4G08480 42.857 6.52e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vian1g02925 Pkinase 1.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02925 - K13414 gmx:100807806 369.777