Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g02917 | ATGTGCAACATCCTTGACCCAATTATGGACAACTATCAAGGTGATTTGAGTGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCATGGGAACTTCATCATCTAAAGCTTGTGCTCCTTTTTCTCTCGATCACTGGCAGTTCTCTTCCGTTTTGGAAGGGTTTGATGGTAACTTTGGTGATCCATTCTCAAACACGAGAGATCCCTTTCTACACCAGCTTGAATTGCCTGTTTGCTTTAACAGCACAAGTTCTGCAGAAATTAGCAGTTCTGGGGCATTGGAAGAAGCAACTTTTTTTGGTGGTGGGGTTGCTGCTAGTAGTAGTAGTAGTAGAAACAGTTGTGTTTTGAAAGAAACGATTTTTGAGGATGATGACACGAGAAGGCCTTGTAATAGCATATTGGCAAACATGATTCAGATCTCTCCCCCCAATGATAAGCTACCCATGTCGCCATTGGTGGAATCTTTGTCAAGGGCACTCAAGCCTTCTGGTGTGGTTTTAGGTGATACCATGATTAATGTGAAGACTTCTGAAGATGATTGCTTGGTGGGTAACAACAACACAAAAGAAATGCAGATCTCACCTCCACGGAATCCATGTCTTAAGAGAAGGAAGAGTCTGGCAAAGAAATCTATTTGTGTGCCTGCACCAGCTGCACCGAATAGCAGACAGAGTGGCGAGGTAGTCCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGATCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCTGCAAGAAAACAAGTTGAGAGAAGCAGAACAGATCCAAACCTGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACACACAGAAATGCTCTAGCTGGTTCTTCTCGATCTCAACCTTCATCAAAAGGCAACAACTTTGGTGCTTCAAAGAATGAAGAAACCAGTCCCCAAAACAATGAAGAGCAGCACGAGGAGAGCAACAGTGATAGCAATAATGTGAATAACAGTGCTTGTGTTCAGGAAGATGGAGAATTCAGTGACATTGGACTCCCTTATAAGCCAATATCCAATATGAAGAGCTACCAACAACAAAAACAGCTTGATCAGGGTTTGTTTGCAGAGTTTGGAGAAATAGAAAAAGCTCACTCATTAAACCTAATGTCTCCACCACAAGGTTTTGATGATCACCAAATGAAATCCAACGCTTTAGATTCATTCCATATCTTTGACTGGAGCGCTGATAACAGCACCGAGTTCCACCTCATTTGA | 1296 | 0.4298 | MCNILDPIMDNYQGDLSDIIRASGASYGSCSMGTSSSKACAPFSLDHWQFSSVLEGFDGNFGDPFSNTRDPFLHQLELPVCFNSTSSAEISSSGALEEATFFGGGVAASSSSSRNSCVLKETIFEDDDTRRPCNSILANMIQISPPNDKLPMSPLVESLSRALKPSGVVLGDTMINVKTSEDDCLVGNNNTKEMQISPPRNPCLKRRKSLAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNLLVITYTSEHNHPWPTHRNALAGSSRSQPSSKGNNFGASKNEETSPQNNEEQHEESNSDSNNVNNSACVQEDGEFSDIGLPYKPISNMKSYQQQKQLDQGLFAEFGEIEKAHSLNLMSPPQGFDDHQMKSNALDSFHIFDWSADNSTEFHLI | 431 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g02917 | 431 | SMART | WRKY_cls | 233 | 293 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian1g02917 | 431 | FunFam | probable WRKY transcription factor 14 | 207 | 287 | - | - | |
Vian1g02917 | 431 | SUPERFAMILY | WRKY DNA-binding domain | 231 | 294 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vian1g02917 | 431 | ProSiteProfiles | WRKY domain profile. | 228 | 294 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian1g02917 | 431 | Pfam | WRKY DNA -binding domain | 235 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian1g02917 | 431 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 15 | 390 | IPR044810 | GO:0003700 | |
Vian1g02917 | 431 | MobiDBLite | consensus disorder prediction | 286 | 346 | - | - | |
Vian1g02917 | 431 | Gene3D | WRKY domain | 222 | 295 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vian1g02917 | 431 | MobiDBLite | consensus disorder prediction | 286 | 324 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g02917 | Vian-Chr1 | 47647353 | 47650618 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g02917 | 1 | 409 | WRKY Transcription Factor Family | AT2G34830 | 40.308 | 7.68e-77 | 244 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vian1g02917 | WRKY | 2.9e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g02917 | - | - | vra:106752855 | 792.341 |