Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02908 ATGGATTTCAGAAAAGTGGGGCTTGCGCCAGCTGAACTTGATGAGGATGGGAAGGAAATCAACCCTCATATTCCCCAGCATACGTCATCTCCGCCTTGGTATCTTAATGCCGAGATACCTAGTTTGAAACATAAAAGAAAATGGAAATCTGATCCCAATTACACCAAATCATGGTACGACAGAGGTGCTAAAATTCATCAGGCAGACAAGTATAGAAAAGGCGAATGCGAAAATCATGTATGGAAAGACCATGAAAAGTGGGAGCAAAATGGACAAACACTCACATTGCCCCTGATGAGGAGAAGAATGGAGGCATTTCCCAGAGACCAACGTGCCTCGCTCGAAGTGTTCAACCCTTCGTCTTCTTACTCCAACGAGAAGCCGGTCAACTCGCCATTGCGCACTCAATCCACGTGGAAGACGTGGATGGAGTCATGCACCGAGGAGCCACAGGAGCAGCAGCAAGACGACGGTCCCGATGAAGTCACAGCCACGTCGTGGATGGCGCTAAAGGACTCCACTCCGCCGCTTCCATCACAAACACTCGCTGCGGTGCTCGGTGGGCCTCAGGCGGAGGTCGGAAATGCCGCGAAGCGCGCTGCGGAATGGGGTCTAGTGCTGAAGACAGACACGAAAACCGGGAAGCCGCAGGGAGTGGCGGTTCGGAAGGTGACCGGTAAGCCGAGGACGGACTCCGGAAACTCCGTTCGGAGCTCCGGCGAGTCCTCCGACGATGGGAGGGAGTACCGGGGAGGAATCCCGAGGGTTTCGGAGGACCTGAGGGATGCTCTTTCGGTCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGAAACCACCGGGAAAGTGGTTGTGGTTGCAGTTAAAGCTTCCAGAGATATCTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTCATTCCGGCTCTTTCTTCAAGCAAGAGGGTATGGGCATTTTCAAGATTTACCACTGACTGTGCCTCCAGTAATTGGAGATCCAGTTTAGGAACTGCTTCAGATCAGAAAGTAGTTATAACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGATAAAGATCAGAGTGAAGATTCTTTCTGGTTCTTCATGTGGAGGTGTGGCCGCTGAGGCCAAGAGAGTTGAGTCAAGCTGGGTTATATTGGACAAAAAGTTGAAGCATGAAAAGAAATATTGCATGGAGCAGCTGCATTGCAATATTGTAATGATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAATAGTTCACCTAAGATGGAACTGAACATGGGTTGTCCATTGAAACTCAGAAGAAACTTGAAAGAGAACACTGGACATGGAGGTATAATCAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCTGAACAAGGGTCACCACCATTGACTGCAACTGATGTTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTTCACTCTGACAACTATGAGAGACAAAGGAGAGGTTTCACCTTCGTCCACGAGGGACTGACAAACCTAGAGGATATTGAGTCTGACTCCGAGAGCGAAAAGCTTAGCATGTCATCCAAGAGTTCATATTTTCAGCCATGGATTGCGAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACGTGCAGAGATCCAGCGACAAGACTTTGGCAACTGCATATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTAGGAATGCTTAACTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCTAAAGGTTCACCTCCTAGATTTTATAGGTTTTCAATTATATGTTGCAACACTTAG 1926 0.4725 MDFRKVGLAPAELDEDGKEINPHIPQHTSSPPWYLNAEIPSLKHKRKWKSDPNYTKSWYDRGAKIHQADKYRKGECENHVWKDHEKWEQNGQTLTLPLMRRRMEAFPRDQRASLEVFNPSSSYSNEKPVNSPLRTQSTWKTWMESCTEEPQEQQQDDGPDEVTATSWMALKDSTPPLPSQTLAAVLGGPQAEVGNAAKRAAEWGLVLKTDTKTGKPQGVAVRKVTGKPRTDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSVQKGRHEEEMGTSETTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPALSSSKRVWAFSRFTTDCASSNWRSSLGTASDQKVVITKSCSQLVLQLHDFYDPEKIKIRVKILSGSSCGGVAAEAKRVESSWVILDKKLKHEKKYCMEQLHCNIVMMKRSRPKILRLNLNSSPKMELNMGCPLKLRRNLKENTGHGGIIRGPAVTPASSPEQGSPPLTATDVGTSSISSSDPATSPFFHSDNYERQRRGFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSKHEDNVQRSSDKTLATAYEALLQKFSKLDEDPILGMLNCKIDVNLSKSVREAISLAKGSPPRFYRFSIICCNT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02908 641 MobiDBLite consensus disorder prediction 214 254 - -
Vian1g02908 641 PANTHER STEP II SPLICING FACTOR SLU7 4 85 IPR039974 GO:0000398|GO:0030628
Vian1g02908 641 MobiDBLite consensus disorder prediction 1 22 - -
Vian1g02908 641 MobiDBLite consensus disorder prediction 479 512 - -
Vian1g02908 641 MobiDBLite consensus disorder prediction 466 512 - -
Vian1g02908 641 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02908 Vian-Chr1 47526598 47530256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02908 106 265 AGC Kinase Gene Family AT3G45780 46.154 9.18e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02908 - - var:108321016 731.48