Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02873 ATGCAGACTCAGGAATATTTTCTCCCGGAGAAGATGGTACTTCCTTTGGCAGATGACTCCATTGATGCTAATGCTCATATGCATGCTCCACTTGCTTCTGCCTTTGATGCTTTTTTACCTCCAGCTGTGGGGCAGATAACACCCTTTGAAAGATTTAAATTGCAACCCTCTGAGGCATGCCCCAAGAATTTTGTTATCTTTGATCAAACAGATCAGCGAAGTAGGATTATGTTCAATCCTGCAATGACCTACAAATTTAATAGTCCTGGCTTAAATGTTCATGCTAATTTTTCTCAAGATTTTGAGAAGAATAAAGTCAATCAAATGGAAAGAGAATTGTCATCTCCTTTTGAAGAAGATCCTAATGACATTGATGCATTGTTGAGCATAGGAGCTGATGAACTAGAAGACTTTGATGAGGAAGAAATAAGCACAGCAAGGACTCATGAAAATTATGAAAATTTATCTGATACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAGGCTGTCATCATCTTCTGTACACAAGTCTTCTGAGGCTAATGATGGGAATAACAGGGAGATAAAGAGGATGGTGAGGATGTTGAGAAAGATCGTGCCTGGTGGAGGTAATCAAATGGATTCTGTTACTGTTTTAGATGAAGCTGTCAAGTACCTAAAGTCTCTCAAAGTTGAGGTGGAACAATTTGGAGTTGAACCATGA 705 0.3901 MQTQEYFLPEKMVLPLADDSIDANAHMHAPLASAFDAFLPPAVGQITPFERFKLQPSEACPKNFVIFDQTDQRSRIMFNPAMTYKFNSPGLNVHANFSQDFEKNKVNQMERELSSPFEEDPNDIDALLSIGADELEDFDEEEISTARTHENYENLSDTCSSYCSKSRKRLSSSSVHKSSEANDGNNREIKRMVRMLRKIVPGGGNQMDSVTVLDEAVKYLKSLKVEVEQFGVEP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02873 234 PANTHER TRANSCRIPTION FACTOR BHLH145 22 233 IPR037546 -
Vian1g02873 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 230 IPR036638 GO:0046983
Vian1g02873 234 Gene3D - 186 231 IPR036638 GO:0046983
Vian1g02873 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 223 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02873 16 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 41.803 4.02e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02873 - - vra:106768906 431.795